Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NSQ70_RS01985 Genome accession   NZ_CP151992
Coordinates   377465..377893 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus sp. FSL R5-0397     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 372465..382893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ70_RS01955 (NSQ70_01955) - 372610..372939 (+) 330 WP_024718960.1 YckD family protein -
  NSQ70_RS01960 (NSQ70_01960) - 372986..373750 (-) 765 WP_268373347.1 MBL fold metallo-hydrolase -
  NSQ70_RS01965 (NSQ70_01965) - 373866..374285 (+) 420 WP_024718958.1 Lrp/AsnC family transcriptional regulator -
  NSQ70_RS01970 (NSQ70_01970) - 374310..375116 (+) 807 WP_268373349.1 AAC(3) family N-acetyltransferase -
  NSQ70_RS01975 (NSQ70_01975) comJ 375118..375504 (-) 387 WP_342502402.1 competence protein ComJ -
  NSQ70_RS01980 (NSQ70_01980) - 375641..377338 (-) 1698 WP_342502403.1 methyl-accepting chemotaxis protein -
  NSQ70_RS01985 (NSQ70_01985) nucA/comI 377465..377893 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NSQ70_RS01990 (NSQ70_01990) - 378262..380331 (+) 2070 WP_041508230.1 hydantoinase/oxoprolinase family protein -
  NSQ70_RS01995 (NSQ70_01995) - 380321..382306 (+) 1986 WP_144679653.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=983897 NSQ70_RS01985 WP_007498233.1 377465..377893(-) (nucA/comI) [Bacillus sp. FSL R5-0397]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=983897 NSQ70_RS01985 WP_007498233.1 377465..377893(-) (nucA/comI) [Bacillus sp. FSL R5-0397]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCAAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment