Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   NST15_RS11170 Genome accession   NZ_CP151991
Coordinates   2184702..2185505 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL R5-0820     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2179702..2190505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST15_RS11155 (NST15_11155) - 2181918..2182154 (+) 237 WP_008342229.1 DUF2627 domain-containing protein -
  NST15_RS11160 (NST15_11160) - 2182188..2182925 (-) 738 WP_008342228.1 glycerophosphodiester phosphodiesterase -
  NST15_RS11165 (NST15_11165) - 2183152..2184252 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  NST15_RS11170 (NST15_11170) spo0A 2184702..2185505 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NST15_RS11175 (NST15_11175) spoIVB 2185789..2187066 (-) 1278 WP_065460685.1 SpoIVB peptidase -
  NST15_RS11180 (NST15_11180) recN 2187265..2188998 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  NST15_RS11185 (NST15_11185) argR 2189033..2189482 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=983863 NST15_RS11170 WP_008342226.1 2184702..2185505(-) (spo0A) [Bacillus sp. FSL R5-0820]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=983863 NST15_RS11170 WP_008342226.1 2184702..2185505(-) (spo0A) [Bacillus sp. FSL R5-0820]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGATAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCGGTTGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTTGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACAATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCAACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment