Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   NST15_RS05700 Genome accession   NZ_CP151991
Coordinates   1132671..1134497 (+) Length   608 a.a.
NCBI ID   WP_342498930.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0820     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1127671..1139497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST15_RS05680 (NST15_05680) - 1127932..1128597 (-) 666 WP_007499010.1 TerC family protein -
  NST15_RS05685 (NST15_05685) mecA 1128862..1129527 (+) 666 WP_008348474.1 adaptor protein MecA Regulator
  NST15_RS05690 (NST15_05690) cls 1129613..1131133 (+) 1521 WP_008348473.1 cardiolipin synthase -
  NST15_RS05695 (NST15_05695) - 1131296..1132456 (+) 1161 WP_342498929.1 competence protein CoiA family protein -
  NST15_RS05700 (NST15_05700) pepF 1132671..1134497 (+) 1827 WP_342498930.1 oligoendopeptidase F Regulator
  NST15_RS05705 (NST15_05705) - 1134785..1134958 (-) 174 WP_008348466.1 hypothetical protein -
  NST15_RS05710 (NST15_05710) - 1135255..1136166 (-) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  NST15_RS05715 (NST15_05715) - 1136163..1136561 (-) 399 WP_057079696.1 thiol management oxidoreductase -
  NST15_RS05720 (NST15_05720) - 1136839..1137603 (-) 765 WP_008348461.1 lytic transglycosylase domain-containing protein -
  NST15_RS05725 (NST15_05725) - 1137629..1138204 (-) 576 WP_048001687.1 CYTH domain-containing protein -
  NST15_RS05730 (NST15_05730) - 1138422..1138787 (+) 366 WP_008348459.1 hypothetical protein -
  NST15_RS05735 (NST15_05735) - 1138821..1139450 (+) 630 WP_008348457.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70241.95 Da        Isoelectric Point: 5.2858

>NTDB_id=983850 NST15_RS05700 WP_342498930.1 1132671..1134497(+) (pepF) [Bacillus sp. FSL R5-0820]
MTSQNSNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDLLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=983850 NST15_RS05700 WP_342498930.1 1132671..1134497(+) (pepF) [Bacillus sp. FSL R5-0820]
ATGACTTCACAAAATAGCAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCATGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCTACTTTCTGAAAAGCTTGGCAAGCTTTAT
ACATATGCGCACATGAAATACGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGCTGCAGCAATTTATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAAGAGCGTCCGCATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTTCCTTCTGTTAAGGATGAAAATGGAGAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAGTATAAGAATACTTTGGCGTCTACA
CTCAGCGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCGGCAAGAGAAGCAGCGTTATCACG
AAATAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACATCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGCGCATATTCTTCTGGAAGCTATG
GCACGAATCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACGCTGGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCTTACGGAAACTACAGCATTTTTGTAGCGGAAGTAGCTTCTAC
AACAAACGAAGCATTACTAGGTGAATACTTACTCAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCACT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCATCTCATTCATGTGAAAGCGCAA
GAAGGGGAGGCATTAACGCCAGAGTTTATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGACGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACGCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCAACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCGGTGGAGCGCTATACAGACTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATCAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCGAAAGAACCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTGGTGAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-590)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48

Multiple sequence alignment