Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   NSQ30_RS16270 Genome accession   NZ_CP151990
Coordinates   3085748..3085888 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus sp. FSL R7-0651     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3080748..3090888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ30_RS16245 (NSQ30_16245) - 3081070..3081459 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  NSQ30_RS16250 (NSQ30_16250) comA 3081483..3082124 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  NSQ30_RS16255 (NSQ30_16255) comP 3082205..3084511 (-) 2307 WP_044140820.1 ATP-binding protein Regulator
  NSQ30_RS16260 (NSQ30_16260) comX 3084525..3084695 (-) 171 WP_012011107.1 competence pheromone ComX -
  NSQ30_RS16265 (NSQ30_16265) - 3084673..3085596 (-) 924 WP_106029260.1 polyprenyl synthetase family protein -
  NSQ30_RS16270 (NSQ30_16270) degQ 3085748..3085888 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NSQ30_RS16275 (NSQ30_16275) - 3086394..3086747 (+) 354 WP_113768032.1 inner spore coat protein -
  NSQ30_RS16280 (NSQ30_16280) - 3086778..3088004 (-) 1227 WP_106066310.1 HDOD domain-containing protein -
  NSQ30_RS16285 (NSQ30_16285) - 3088146..3089615 (-) 1470 WP_058013789.1 nicotinate phosphoribosyltransferase -
  NSQ30_RS16290 (NSQ30_16290) - 3089633..3090184 (-) 552 WP_012011112.1 isochorismatase family cysteine hydrolase -
  NSQ30_RS16295 (NSQ30_16295) - 3090245..3090652 (-) 408 WP_044140823.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=983817 NSQ30_RS16270 WP_003213123.1 3085748..3085888(-) (degQ) [Bacillus sp. FSL R7-0651]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=983817 NSQ30_RS16270 WP_003213123.1 3085748..3085888(-) (degQ) [Bacillus sp. FSL R7-0651]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696

Multiple sequence alignment