Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ30_RS07390 Genome accession   NZ_CP151990
Coordinates   1469972..1470553 (+) Length   193 a.a.
NCBI ID   WP_044142051.1    Uniprot ID   A0AB34QPU5
Organism   Bacillus sp. FSL R7-0651     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464972..1475553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ30_RS07360 (NSQ30_07360) dapD 1465094..1465804 (+) 711 WP_044142056.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ30_RS07365 (NSQ30_07365) - 1465839..1467017 (+) 1179 WP_065097186.1 N-acetyldiaminopimelate deacetylase -
  NSQ30_RS07370 (NSQ30_07370) - 1467068..1467310 (+) 243 WP_003211408.1 YkuS family protein -
  NSQ30_RS07375 (NSQ30_07375) - 1467340..1468146 (-) 807 WP_065097187.1 mechanosensitive ion channel family protein -
  NSQ30_RS07380 (NSQ30_07380) ahpA 1468418..1468960 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NSQ30_RS07385 (NSQ30_07385) - 1469043..1469501 (+) 459 WP_050945138.1 TlpA disulfide reductase family protein -
  NSQ30_RS07390 (NSQ30_07390) rok 1469972..1470553 (+) 582 WP_044142051.1 transcriptional regulator Rok Regulator
  NSQ30_RS07395 (NSQ30_07395) - 1470604..1471521 (-) 918 WP_065097188.1 sigmaE regulated sporulation protein -
  NSQ30_RS07400 (NSQ30_07400) - 1471606..1472187 (+) 582 WP_185107989.1 molybdenum cofactor guanylyltransferase -
  NSQ30_RS07405 (NSQ30_07405) - 1472217..1473233 (+) 1017 WP_185107987.1 thiazole biosynthesis adenylyltransferase ThiF -
  NSQ30_RS07410 (NSQ30_07410) glp 1473243..1474520 (+) 1278 WP_260564573.1 gephyrin-like molybdotransferase Glp -
  NSQ30_RS07415 (NSQ30_07415) mobB 1474502..1475026 (+) 525 WP_065097413.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSQ30_RS07420 (NSQ30_07420) - 1475023..1475514 (+) 492 WP_044142044.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21788.74 Da        Isoelectric Point: 9.7309

>NTDB_id=983793 NSQ30_RS07390 WP_044142051.1 1469972..1470553(+) (rok) [Bacillus sp. FSL R7-0651]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNSASTLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=983793 NSQ30_RS07390 WP_044142051.1 1469972..1470553(+) (rok) [Bacillus sp. FSL R7-0651]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAAACGGATTCACTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCTGCACAATCACAATCAAATTCTGCATCAACTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCAGCGATTAAAAGCTCTGAACTTCAAAAAGAAATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
TATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.053

98.446

0.798

Multiple sequence alignment