Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ30_RS05175 Genome accession   NZ_CP151990
Coordinates   1069090..1070040 (+) Length   316 a.a.
NCBI ID   WP_065098909.1    Uniprot ID   -
Organism   Bacillus sp. FSL R7-0651     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1064090..1075040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ30_RS05150 (NSQ30_05150) - 1065403..1065885 (+) 483 WP_106067179.1 hypothetical protein -
  NSQ30_RS05155 (NSQ30_05155) - 1065921..1066613 (-) 693 WP_223252844.1 PLP-dependent aminotransferase family protein -
  NSQ30_RS05160 (NSQ30_05160) - 1066652..1067269 (-) 618 WP_223252845.1 GntR family transcriptional regulator -
  NSQ30_RS05165 (NSQ30_05165) - 1067414..1068583 (+) 1170 WP_065098910.1 MFS transporter -
  NSQ30_RS05170 (NSQ30_05170) - 1068648..1068923 (+) 276 WP_044140712.1 barstar family protein -
  NSQ30_RS05175 (NSQ30_05175) ceuB 1069090..1070040 (+) 951 WP_065098909.1 ABC transporter permease Machinery gene
  NSQ30_RS05180 (NSQ30_05180) - 1070033..1070983 (+) 951 WP_065098908.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ30_RS05185 (NSQ30_05185) - 1070974..1071732 (+) 759 WP_044140715.1 ATP-binding cassette domain-containing protein -
  NSQ30_RS05190 (NSQ30_05190) - 1071755..1072699 (+) 945 WP_065098906.1 siderophore ABC transporter substrate-binding protein -
  NSQ30_RS05195 (NSQ30_05195) - 1072841..1073797 (+) 957 WP_065098905.1 LCP family protein -
  NSQ30_RS05200 (NSQ30_05200) - 1073866..1074228 (-) 363 WP_003210969.1 hypothetical protein -
  NSQ30_RS05205 (NSQ30_05205) - 1074379..1074996 (+) 618 WP_080772985.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34876.21 Da        Isoelectric Point: 9.6341

>NTDB_id=983781 NSQ30_RS05175 WP_065098909.1 1069090..1070040(+) (ceuB) [Bacillus sp. FSL R7-0651]
MKLYQLSLLFVCLACVSLFVGVQDLSILQLFHLTDEQVHTLVSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHASPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAINLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSGIFLYMLLRRKHYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983781 NSQ30_RS05175 WP_065098909.1 1069090..1070040(+) (ceuB) [Bacillus sp. FSL R7-0651]
ATGAAGTTGTATCAATTAAGTTTATTATTTGTATGTTTGGCATGTGTATCACTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCATACGTTAGTTTCAAGTCGCATCCCGCGTCTCATGAGTATTGTGC
TTGCTGGCATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAGCCCGCTCATGAAAATGGG
AATCGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATCT
ATGTACCTTTAGTCGGTTTAATGTTTGGCGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATCTGATT
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTTCTCTATGTGAGTGTTCC
ACTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCGGGAATGGGTGAGAGCTTTGCCATCAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATTGTTTCGATGATTACATCTGTCACCATATTAACTGTCGGGATG
CTACCATTCCTAGGCTTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAGAGCCTTCCGCATAC
AGCCTTACTAGGAGCCATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTAATCATTTATCCATATGAAATTTCAGTTG
GGCTCATGGTAGGCATCATCGGAAGTGGGATCTTCCTGTACATGTTATTAAGGAGGAAACACTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.827

95.253

0.494

Multiple sequence alignment