Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   NST73_RS10485 Genome accession   NZ_CP151989
Coordinates   2060256..2060891 (+) Length   211 a.a.
NCBI ID   WP_017359733.1    Uniprot ID   A0A653S7S4
Organism   Bacillus sp. FSL W7-1034     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2055256..2065891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST73_RS10445 (NST73_10445) - 2055441..2056559 (+) 1119 WP_024718533.1 NADH-dependent flavin oxidoreductase -
  NST73_RS10450 (NST73_10450) - 2056609..2057115 (-) 507 WP_008344623.1 PTS glucose transporter subunit IIA -
  NST73_RS10455 (NST73_10455) - 2057284..2057703 (+) 420 WP_007500867.1 Hsp20/alpha crystallin family protein -
  NST73_RS10460 (NST73_10460) - 2057725..2058156 (-) 432 WP_025207531.1 YppG family protein -
  NST73_RS10465 (NST73_10465) - 2058265..2058636 (-) 372 WP_017359730.1 YppE family protein -
  NST73_RS10470 (NST73_10470) - 2058695..2058931 (-) 237 WP_024718530.1 DUF5446 family protein -
  NST73_RS10475 (NST73_10475) sspM 2059125..2059229 (+) 105 WP_017359731.1 acid-soluble spore protein SspM -
  NST73_RS10480 (NST73_10480) - 2059253..2060209 (-) 957 WP_024718529.1 DUF2515 domain-containing protein -
  NST73_RS10485 (NST73_10485) recU 2060256..2060891 (+) 636 WP_017359733.1 Holliday junction resolvase RecU Machinery gene
  NST73_RS10490 (NST73_10490) - 2060911..2063583 (+) 2673 WP_035702944.1 PBP1A family penicillin-binding protein -
  NST73_RS10495 (NST73_10495) - 2063619..2064128 (-) 510 WP_144679443.1 YpoC family protein -
  NST73_RS10500 (NST73_10500) nth 2064125..2064787 (-) 663 WP_144679441.1 endonuclease III -
  NST73_RS10505 (NST73_10505) - 2064805..2065509 (-) 705 WP_144679439.1 DnaD domain-containing protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 24314.60 Da        Isoelectric Point: 9.6582

>NTDB_id=983740 NST73_RS10485 WP_017359733.1 2060256..2060891(+) (recU) [Bacillus sp. FSL W7-1034]
MIRYPNGKSYQPIQQIGTKKRISGESSYSNRGMTLEADLNETNQYYLVNGIAVIHKKPTPVQIVNVDYPKRSAAVIKEAY
FKQSSTTDYNGVYKGRYIDFEAKETKSTTSFPLKNFHDHQIEHMKQVEKQGGICFVIISAFGSVYYLSATDLFFFWERQQ
QNGRKSISKDELMEAGHLMTLGYSPRIDYIKVVETLHFSDDSKQHLRSKKV

Nucleotide


Download         Length: 636 bp        

>NTDB_id=983740 NST73_RS10485 WP_017359733.1 2060256..2060891(+) (recU) [Bacillus sp. FSL W7-1034]
ATGATTCGGTATCCTAACGGAAAATCGTATCAGCCCATTCAACAAATTGGGACAAAAAAAAGAATCAGCGGCGAATCATC
TTATAGTAACCGCGGGATGACGCTTGAAGCTGACTTAAATGAAACGAACCAGTACTATTTGGTCAACGGGATCGCAGTCA
TTCATAAAAAGCCTACCCCTGTTCAAATTGTCAATGTGGATTATCCAAAAAGAAGCGCTGCTGTCATTAAAGAAGCCTAT
TTTAAACAATCCTCCACAACAGACTACAACGGGGTATACAAAGGGCGTTATATCGATTTTGAAGCAAAGGAAACCAAAAG
CACCACCTCGTTTCCGCTCAAAAATTTCCACGACCATCAAATTGAGCATATGAAACAGGTTGAAAAGCAAGGCGGTATTT
GTTTTGTTATTATATCCGCATTTGGTTCCGTTTATTATTTGTCCGCTACTGACCTCTTCTTCTTTTGGGAGCGGCAGCAG
CAAAACGGCCGTAAATCCATTAGCAAAGATGAATTAATGGAAGCAGGTCACCTCATGACACTTGGATATTCGCCAAGAAT
TGATTATATTAAAGTAGTGGAGACACTTCATTTTTCGGATGACAGCAAGCAACATTTACGTTCGAAAAAGGTTTAA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(31-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653S7S4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

72.772

95.735

0.697

Multiple sequence alignment