Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | NST73_RS09100 | Genome accession | NZ_CP151989 |
| Coordinates | 1788714..1789094 (+) | Length | 126 a.a. |
| NCBI ID | WP_224559893.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W7-1034 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1754724..1793506 | 1788714..1789094 | within | 0 |
Gene organization within MGE regions
Location: 1754724..1793506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST73_RS08930 (NST73_08930) | - | 1754724..1754984 (-) | 261 | WP_024720407.1 | YesK family protein | - |
| NST73_RS08935 (NST73_08935) | - | 1755019..1755438 (-) | 420 | WP_024720408.1 | hypothetical protein | - |
| NST73_RS08940 (NST73_08940) | - | 1755629..1756474 (+) | 846 | WP_284725267.1 | SMI1/KNR4 family protein | - |
| NST73_RS08945 (NST73_08945) | - | 1756873..1757982 (+) | 1110 | WP_039166523.1 | RapH N-terminal domain-containing protein | - |
| NST73_RS08950 (NST73_08950) | - | 1757983..1758117 (+) | 135 | WP_259254329.1 | hypothetical protein | - |
| NST73_RS08955 (NST73_08955) | - | 1758206..1760131 (+) | 1926 | WP_144665462.1 | T7SS effector LXG polymorphic toxin | - |
| NST73_RS08960 (NST73_08960) | - | 1760137..1760625 (+) | 489 | WP_144665464.1 | immunity protein YezG family protein | - |
| NST73_RS08965 (NST73_08965) | - | 1760695..1761161 (-) | 467 | Protein_1718 | macro domain-containing protein | - |
| NST73_RS08970 (NST73_08970) | - | 1761347..1761878 (+) | 532 | Protein_1719 | GNAT family N-acetyltransferase | - |
| NST73_RS08975 (NST73_08975) | - | 1762019..1762600 (+) | 582 | WP_342499525.1 | undecaprenyl-diphosphatase | - |
| NST73_RS08980 (NST73_08980) | - | 1762658..1763029 (-) | 372 | WP_024720418.1 | iron chaperone | - |
| NST73_RS08985 (NST73_08985) | - | 1763415..1764068 (+) | 654 | WP_096881450.1 | CotZ-related putative spore coat protein | - |
| NST73_RS08990 (NST73_08990) | - | 1764143..1764487 (+) | 345 | WP_008343952.1 | S-Ena type endospore appendage | - |
| NST73_RS08995 (NST73_08995) | - | 1764532..1765605 (+) | 1074 | WP_342499526.1 | collagen-like protein | - |
| NST73_RS09000 (NST73_09000) | - | 1765851..1766963 (+) | 1113 | WP_342499527.1 | tetratricopeptide repeat protein | - |
| NST73_RS09005 (NST73_09005) | - | 1767427..1767648 (+) | 222 | WP_178930202.1 | hypothetical protein | - |
| NST73_RS09010 (NST73_09010) | - | 1767687..1768382 (-) | 696 | WP_008343947.1 | YoaK family protein | - |
| NST73_RS09015 (NST73_09015) | - | 1768417..1770282 (-) | 1866 | WP_342499528.1 | DNA ligase D | - |
| NST73_RS09020 (NST73_09020) | - | 1770398..1771246 (+) | 849 | WP_035391954.1 | Ku protein | - |
| NST73_RS09025 (NST73_09025) | - | 1771275..1771718 (-) | 444 | WP_007499382.1 | DUF2188 domain-containing protein | - |
| NST73_RS09030 (NST73_09030) | - | 1771878..1772351 (+) | 474 | WP_053215847.1 | VOC family protein | - |
| NST73_RS09035 (NST73_09035) | - | 1772400..1772813 (+) | 414 | WP_144678744.1 | Rrf2 family transcriptional regulator | - |
| NST73_RS09040 (NST73_09040) | - | 1772949..1773797 (+) | 849 | WP_342499529.1 | SDR family oxidoreductase | - |
| NST73_RS09045 (NST73_09045) | - | 1773990..1774706 (+) | 717 | WP_007499377.1 | (Fe-S)-binding protein | - |
| NST73_RS09050 (NST73_09050) | - | 1774728..1776152 (+) | 1425 | WP_342462572.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NST73_RS09055 (NST73_09055) | - | 1776149..1776871 (+) | 723 | WP_268363534.1 | lactate utilization protein C | - |
| NST73_RS09060 (NST73_09060) | - | 1777004..1777912 (+) | 909 | WP_039167701.1 | DMT family transporter | - |
| NST73_RS09065 (NST73_09065) | - | 1777926..1778117 (-) | 192 | WP_326242680.1 | hypothetical protein | - |
| NST73_RS09070 (NST73_09070) | - | 1778225..1780441 (+) | 2217 | WP_342499530.1 | RNA ligase | - |
| NST73_RS09075 (NST73_09075) | - | 1780506..1781216 (+) | 711 | WP_047946233.1 | DUF421 domain-containing protein | - |
| NST73_RS09080 (NST73_09080) | - | 1781445..1782026 (+) | 582 | WP_058213736.1 | TetR/AcrR family transcriptional regulator | - |
| NST73_RS09085 (NST73_09085) | - | 1782048..1785191 (+) | 3144 | WP_342499531.1 | bifunctional cytochrome P450/NADPH--P450 reductase | - |
| NST73_RS09090 (NST73_09090) | - | 1785437..1786345 (+) | 909 | WP_160757649.1 | trypsin-like serine protease | - |
| NST73_RS09095 (NST73_09095) | - | 1786492..1788486 (+) | 1995 | WP_326242675.1 | glycosyltransferase family 39 protein | - |
| NST73_RS09100 (NST73_09100) | nucA/comI | 1788714..1789094 (+) | 381 | WP_224559893.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| NST73_RS09105 (NST73_09105) | - | 1789239..1790087 (+) | 849 | WP_017359585.1 | STAS domain-containing protein | - |
| NST73_RS09110 (NST73_09110) | - | 1790120..1790662 (-) | 543 | WP_017359584.1 | IseA DL-endopeptidase inhibitor family protein | - |
| NST73_RS09115 (NST73_09115) | - | 1790959..1791402 (+) | 444 | WP_144678736.1 | hypothetical protein | - |
| NST73_RS09120 (NST73_09120) | lexA | 1791450..1792070 (-) | 621 | WP_326242672.1 | transcriptional repressor LexA | - |
| NST73_RS09125 (NST73_09125) | yneA | 1792230..1792541 (+) | 312 | WP_007499348.1 | cell division suppressor protein YneA | - |
| NST73_RS09130 (NST73_09130) | - | 1792559..1793206 (+) | 648 | WP_017359583.1 | recombinase family protein | - |
| NST73_RS09135 (NST73_09135) | - | 1793276..1793506 (+) | 231 | WP_061419189.1 | DUF896 domain-containing protein | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13758.38 Da Isoelectric Point: 7.9019
>NTDB_id=983739 NST73_RS09100 WP_224559893.1 1788714..1789094(+) (nucA/comI) [Bacillus sp. FSL W7-1034]
MGALLGGFGEDRSAKGADRYDHVIQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGYPDGKRILFIVK
MGALLGGFGEDRSAKGADRYDHVIQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGYPDGKRILFIVK
Nucleotide
Download Length: 381 bp
>NTDB_id=983739 NST73_RS09100 WP_224559893.1 1788714..1789094(+) (nucA/comI) [Bacillus sp. FSL W7-1034]
ATGGGTGCGTTATTAGGTGGTTTTGGAGAGGATCGTTCCGCAAAAGGAGCAGATCGTTATGATCATGTGATTCAATTTCC
TAAGGAACGGTATCCTGAAACAGGCAGTCATATTCAAGAAGCTATTCGAAAAGGGCACTCAGACGTGTGTACCATTGACC
GAAATGGGGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCCACAAAACCTGGTTTTGACCGGGATGAATGGCCG
ATGGCGGTGTGTCTTGAAGGAGGAAAGGGGGCAAGCGTTCAATATGTCAGTCCATCAGATAATAGAGGCGCTGGTTCATG
GGTCGGGCATCAAATCAGCGGGTATCCTGACGGGAAACGAATTTTATTTATTGTCAAATAA
ATGGGTGCGTTATTAGGTGGTTTTGGAGAGGATCGTTCCGCAAAAGGAGCAGATCGTTATGATCATGTGATTCAATTTCC
TAAGGAACGGTATCCTGAAACAGGCAGTCATATTCAAGAAGCTATTCGAAAAGGGCACTCAGACGTGTGTACCATTGACC
GAAATGGGGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCCACAAAACCTGGTTTTGACCGGGATGAATGGCCG
ATGGCGGTGTGTCTTGAAGGAGGAAAGGGGGCAAGCGTTCAATATGTCAGTCCATCAGATAATAGAGGCGCTGGTTCATG
GGTCGGGCATCAAATCAGCGGGTATCCTGACGGGAAACGAATTTTATTTATTGTCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.824 |
94.444 |
0.556 |