Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NST73_RS01935 Genome accession   NZ_CP151989
Coordinates   364655..365083 (-) Length   142 a.a.
NCBI ID   WP_058336347.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1034     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 359655..370083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST73_RS01905 (NST73_01905) - 359799..360128 (+) 330 WP_024718960.1 YckD family protein -
  NST73_RS01910 (NST73_01910) - 360175..360939 (-) 765 WP_216895540.1 MBL fold metallo-hydrolase -
  NST73_RS01915 (NST73_01915) - 361055..361474 (+) 420 WP_024718958.1 Lrp/AsnC family transcriptional regulator -
  NST73_RS01920 (NST73_01920) - 361499..362305 (+) 807 WP_259254051.1 AAC(3) family N-acetyltransferase -
  NST73_RS01925 (NST73_01925) comJ 362307..362693 (-) 387 WP_039166300.1 competence protein ComJ -
  NST73_RS01930 (NST73_01930) - 362831..364528 (-) 1698 WP_326242339.1 methyl-accepting chemotaxis protein -
  NST73_RS01935 (NST73_01935) nucA/comI 364655..365083 (-) 429 WP_058336347.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NST73_RS01940 (NST73_01940) - 365451..367520 (+) 2070 WP_041508230.1 hydantoinase/oxoprolinase family protein -
  NST73_RS01945 (NST73_01945) - 367510..369495 (+) 1986 WP_144668204.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15912.88 Da        Isoelectric Point: 6.4881

>NTDB_id=983713 NST73_RS01935 WP_058336347.1 364655..365083(-) (nucA/comI) [Bacillus sp. FSL W7-1034]
MKLLKTILLLLLIVIGVATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=983713 NST73_RS01935 WP_058336347.1 364655..365083(-) (nucA/comI) [Bacillus sp. FSL W7-1034]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTGTAGCAACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGTTATCCAGAAACTGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGGAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment