Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NST09_RS06990 Genome accession   NZ_CP151988
Coordinates   1373285..1373866 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1346     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368285..1378866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST09_RS06965 (NST09_06965) - 1368949..1370127 (+) 1179 WP_125588953.1 N-acetyldiaminopimelate deacetylase -
  NST09_RS06970 (NST09_06970) - 1370178..1370420 (+) 243 WP_003211408.1 YkuS family protein -
  NST09_RS06975 (NST09_06975) - 1370445..1371254 (-) 810 WP_039963326.1 mechanosensitive ion channel family protein -
  NST09_RS06980 (NST09_06980) ahpA 1371526..1372068 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NST09_RS06985 (NST09_06985) - 1372345..1372803 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NST09_RS06990 (NST09_06990) rok 1373285..1373866 (+) 582 WP_007498648.1 hypothetical protein Regulator
  NST09_RS06995 (NST09_06995) - 1373929..1374846 (-) 918 WP_342493471.1 sigmaE regulated sporulation protein -
  NST09_RS07000 (NST09_07000) - 1374930..1375511 (+) 582 WP_017359414.1 molybdenum cofactor guanylyltransferase -
  NST09_RS07005 (NST09_07005) - 1375541..1376557 (+) 1017 WP_081114456.1 MoeB/ThiF family adenylyltransferase -
  NST09_RS07010 (NST09_07010) glp 1376567..1377841 (+) 1275 WP_217815725.1 gephyrin-like molybdotransferase Glp -
  NST09_RS07015 (NST09_07015) mobB 1377823..1378350 (+) 528 WP_342493472.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NST09_RS07020 (NST09_07020) - 1378343..1378834 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=983671 NST09_RS06990 WP_007498648.1 1373285..1373866(+) (rok) [Bacillus sp. FSL W7-1346]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=983671 NST09_RS06990 WP_007498648.1 1373285..1373866(+) (rok) [Bacillus sp. FSL W7-1346]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment