Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NST09_RS06860 Genome accession   NZ_CP151988
Coordinates   1352769..1353230 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus sp. FSL W7-1346     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1347769..1358230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST09_RS06835 (NST09_06835) - 1348173..1349057 (+) 885 WP_342493468.1 cation diffusion facilitator family transporter -
  NST09_RS06840 (NST09_06840) - 1349122..1349274 (-) 153 WP_008348040.1 hypothetical protein -
  NST09_RS06845 (NST09_06845) - 1349575..1350114 (+) 540 WP_007498690.1 RDD family protein -
  NST09_RS06850 (NST09_06850) - 1350240..1351550 (+) 1311 WP_342493469.1 MFS transporter -
  NST09_RS06855 (NST09_06855) - 1351624..1352532 (+) 909 WP_008348035.1 chemotaxis protein -
  NST09_RS06860 (NST09_06860) kre 1352769..1353230 (-) 462 WP_007498684.1 YkyB family protein Regulator
  NST09_RS06865 (NST09_06865) - 1353450..1354346 (-) 897 WP_236810420.1 AraC family transcriptional regulator -
  NST09_RS06870 (NST09_06870) - 1354460..1355404 (+) 945 WP_191218877.1 EamA family transporter -
  NST09_RS06875 (NST09_06875) - 1355561..1355776 (-) 216 WP_008348016.1 hypothetical protein -
  NST09_RS06880 (NST09_06880) - 1355944..1356120 (+) 177 WP_008348014.1 hypothetical protein -
  NST09_RS06885 (NST09_06885) - 1356348..1357625 (-) 1278 WP_048001612.1 MFS transporter -
  NST09_RS06890 (NST09_06890) - 1357699..1358196 (-) 498 WP_008348009.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=983670 NST09_RS06860 WP_007498684.1 1352769..1353230(-) (kre) [Bacillus sp. FSL W7-1346]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=983670 NST09_RS06860 WP_007498684.1 1352769..1353230(-) (kre) [Bacillus sp. FSL W7-1346]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment