Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NST09_RS04220 Genome accession   NZ_CP151988
Coordinates   854936..855727 (+) Length   263 a.a.
NCBI ID   WP_159145525.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1346     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 849936..860727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST09_RS04185 (NST09_04185) - 850025..850573 (+) 549 WP_008341670.1 thioredoxin family protein -
  NST09_RS04190 (NST09_04190) - 850912..851379 (+) 468 WP_007496690.1 DUF393 domain-containing protein -
  NST09_RS04195 (NST09_04195) - 851415..852671 (-) 1257 WP_035391280.1 transcriptional regulator -
  NST09_RS04200 (NST09_04200) - 852942..853529 (+) 588 WP_232516929.1 nitroreductase -
  NST09_RS04205 (NST09_04205) - 853564..853719 (-) 156 WP_048002109.1 YfhD family protein -
  NST09_RS04210 (NST09_04210) - 853781..853891 (-) 111 WP_017358836.1 YfhE family protein -
  NST09_RS04215 (NST09_04215) - 853944..854840 (-) 897 WP_099496396.1 TIGR01777 family oxidoreductase -
  NST09_RS04220 (NST09_04220) recX 854936..855727 (+) 792 WP_159145525.1 recombination regulator RecX Regulator
  NST09_RS04225 (NST09_04225) - 855731..856045 (+) 315 WP_079919263.1 YfhH family protein -
  NST09_RS04230 (NST09_04230) - 856108..856281 (-) 174 WP_003217811.1 YpzG family protein -
  NST09_RS04235 (NST09_04235) - 856307..856456 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NST09_RS04240 (NST09_04240) - 856573..856845 (+) 273 WP_017366871.1 YfhJ family protein -
  NST09_RS04245 (NST09_04245) - 857146..858129 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30642.09 Da        Isoelectric Point: 7.0789

>NTDB_id=983653 NST09_RS04220 WP_159145525.1 854936..855727(+) (recX) [Bacillus sp. FSL W7-1346]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDIIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=983653 NST09_RS04220 WP_159145525.1 854936..855727(+) (recX) [Bacillus sp. FSL W7-1346]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCATATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATATAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment