Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSQ11_RS05605 Genome accession   NZ_CP151987
Coordinates   1114007..1114972 (+) Length   321 a.a.
NCBI ID   WP_342501292.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1582     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1109007..1119972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ11_RS05575 (NSQ11_05575) argF 1109330..1110280 (+) 951 WP_017360177.1 ornithine carbamoyltransferase -
  NSQ11_RS05580 (NSQ11_05580) - 1110384..1110563 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ11_RS05585 (NSQ11_05585) - 1110733..1111998 (+) 1266 WP_007499050.1 MFS transporter -
  NSQ11_RS05590 (NSQ11_05590) - 1112118..1112312 (-) 195 WP_008348514.1 YjzD family protein -
  NSQ11_RS05595 (NSQ11_05595) - 1112525..1113265 (+) 741 WP_007499048.1 hypothetical protein -
  NSQ11_RS05600 (NSQ11_05600) - 1113341..1113916 (+) 576 WP_017360175.1 hypothetical protein -
  NSQ11_RS05605 (NSQ11_05605) med 1114007..1114972 (+) 966 WP_342501292.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ11_RS05610 (NSQ11_05610) comZ 1114984..1115181 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NSQ11_RS05615 (NSQ11_05615) - 1115384..1115617 (-) 234 WP_017360173.1 hypothetical protein -
  NSQ11_RS05620 (NSQ11_05620) - 1115787..1116725 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NSQ11_RS05625 (NSQ11_05625) fabF 1116747..1117988 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  NSQ11_RS05630 (NSQ11_05630) - 1118066..1118860 (+) 795 WP_046527014.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35916.91 Da        Isoelectric Point: 5.9311

>NTDB_id=983600 NSQ11_RS05605 WP_342501292.1 1114007..1114972(+) (med) [Bacillus sp. FSL W7-1582]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKEIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=983600 NSQ11_RS05605 WP_342501292.1 1114007..1114972(+) (med) [Bacillus sp. FSL W7-1582]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGTGCTTTTGTGAAAGACATTGAGAAGGAAATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632

Multiple sequence alignment