Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ11_RS05225 Genome accession   NZ_CP151987
Coordinates   1033619..1034569 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus sp. FSL W7-1582     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1028619..1039569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ11_RS05205 (NSQ11_05205) - 1029854..1030336 (+) 483 WP_046343108.1 hypothetical protein -
  NSQ11_RS05210 (NSQ11_05210) - 1030367..1031806 (-) 1440 WP_025207099.1 PLP-dependent aminotransferase family protein -
  NSQ11_RS05215 (NSQ11_05215) - 1031950..1033119 (+) 1170 WP_342501288.1 MFS transporter -
  NSQ11_RS05220 (NSQ11_05220) - 1033182..1033460 (+) 279 WP_025207101.1 barstar family protein -
  NSQ11_RS05225 (NSQ11_05225) ceuB 1033619..1034569 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  NSQ11_RS05230 (NSQ11_05230) - 1034562..1035512 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ11_RS05235 (NSQ11_05235) - 1035503..1036261 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  NSQ11_RS05240 (NSQ11_05240) - 1036284..1037228 (+) 945 WP_079919113.1 siderophore ABC transporter substrate-binding protein -
  NSQ11_RS05245 (NSQ11_05245) - 1037368..1038324 (+) 957 WP_007499147.1 LCP family protein -
  NSQ11_RS05250 (NSQ11_05250) - 1038359..1038793 (-) 435 WP_116306680.1 enoyl-CoA hydratase -
  NSQ11_RS05255 (NSQ11_05255) - 1038879..1039241 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=983597 NSQ11_RS05225 WP_017366964.1 1033619..1034569(+) (ceuB) [Bacillus sp. FSL W7-1582]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983597 NSQ11_RS05225 WP_017366964.1 1033619..1034569(+) (ceuB) [Bacillus sp. FSL W7-1582]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACTTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGGGTGATTATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATTATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment