Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NSU13_RS11170 Genome accession   NZ_CP151986
Coordinates   2185324..2186127 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL M8-0049     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2180324..2191127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU13_RS11155 (NSU13_11155) - 2182529..2182765 (+) 237 WP_251232015.1 DUF2627 domain-containing protein -
  NSU13_RS11160 (NSU13_11160) - 2182802..2183539 (-) 738 WP_041117937.1 glycerophosphodiester phosphodiesterase -
  NSU13_RS11165 (NSU13_11165) - 2183767..2184867 (-) 1101 WP_056767297.1 Rap family tetratricopeptide repeat protein -
  NSU13_RS11170 (NSU13_11170) spo0A 2185324..2186127 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  NSU13_RS11175 (NSU13_11175) spoIVB 2186413..2187690 (-) 1278 WP_034280268.1 SpoIVB peptidase -
  NSU13_RS11180 (NSU13_11180) recN 2187890..2189623 (-) 1734 WP_101676880.1 DNA repair protein RecN Machinery gene
  NSU13_RS11185 (NSU13_11185) argR 2189657..2190106 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  NSU13_RS11190 (NSU13_11190) - 2190270..2191124 (-) 855 WP_101676879.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=983556 NSU13_RS11170 WP_024422935.1 2185324..2186127(-) (spo0A) [Bacillus sp. FSL M8-0049]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=983556 NSU13_RS11170 WP_024422935.1 2185324..2186127(-) (spo0A) [Bacillus sp. FSL M8-0049]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAAATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAGGTCGCTTGGAGCAGAGGAAACATCGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment