Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSU13_RS06845 Genome accession   NZ_CP151986
Coordinates   1337129..1337701 (+) Length   190 a.a.
NCBI ID   WP_025092353.1    Uniprot ID   A0A5C0WCR7
Organism   Bacillus sp. FSL M8-0049     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1332129..1342701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU13_RS06815 (NSU13_06815) dapD 1332245..1332955 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSU13_RS06820 (NSU13_06820) - 1333037..1334167 (+) 1131 WP_081124333.1 N-acetyldiaminopimelate deacetylase -
  NSU13_RS06825 (NSU13_06825) - 1334218..1334460 (+) 243 WP_024424725.1 YkuS family protein -
  NSU13_RS06830 (NSU13_06830) - 1334483..1335292 (-) 810 WP_226014916.1 mechanosensitive ion channel family protein -
  NSU13_RS06835 (NSU13_06835) ahpA 1335564..1336106 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NSU13_RS06840 (NSU13_06840) - 1336189..1336647 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  NSU13_RS06845 (NSU13_06845) rok 1337129..1337701 (+) 573 WP_025092353.1 transcriptional regulator Rok Regulator
  NSU13_RS06850 (NSU13_06850) - 1337749..1338666 (-) 918 WP_034623329.1 hypothetical protein -
  NSU13_RS06855 (NSU13_06855) - 1338752..1339333 (+) 582 WP_342489957.1 molybdenum cofactor guanylyltransferase -
  NSU13_RS06860 (NSU13_06860) - 1339363..1340379 (+) 1017 WP_342489958.1 thiazole biosynthesis adenylyltransferase ThiF -
  NSU13_RS06865 (NSU13_06865) glp 1340389..1341666 (+) 1278 WP_326136485.1 gephyrin-like molybdotransferase Glp -
  NSU13_RS06870 (NSU13_06870) mobB 1341648..1342172 (+) 525 WP_065214461.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSU13_RS06875 (NSU13_06875) - 1342169..1342660 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21547.49 Da        Isoelectric Point: 9.7309

>NTDB_id=983548 NSU13_RS06845 WP_025092353.1 1337129..1337701(+) (rok) [Bacillus sp. FSL M8-0049]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=983548 NSU13_RS06845 WP_025092353.1 1337129..1337701(+) (rok) [Bacillus sp. FSL M8-0049]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGAGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAAACCCAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAACTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WCR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment