Detailed information NTG0983546

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN9LR_RS13940
• Genome accession: NZ_CP183996
• Coordinates: 2839526..2840551 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 875
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2834526..2845551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LR_RS13910 (ACN9LR_13910)	zapB	2834610..2834855 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACN9LR_RS13915 (ACN9LR_13915)	rraA	2834940..2835425 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN9LR_RS13920 (ACN9LR_13920)	menA	2835518..2836444 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN9LR_RS13925 (ACN9LR_13925)	hslU	2836511..2837842 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACN9LR_RS13930 (ACN9LR_13930)	hslV	2837852..2838382 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN9LR_RS13935 (ACN9LR_13935)	ftsN	2838475..2839434 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACN9LR_RS13940 (ACN9LR_13940)	cytR	2839526..2840551 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACN9LR_RS13945 (ACN9LR_13945)	priA	2840707..2842905 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACN9LR_RS13950 (ACN9LR_13950)	rpmE	2843108..2843320 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN9LR_RS13955 (ACN9LR_13955)	yiiX	2843381..2843989 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACN9LR_RS13960 (ACN9LR_13960)	metJ	2844049..2844366 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=983546 ACN9LR_RS13940 WP_000644908.1 2839526..2840551(-) (cytR) [Escherichia coli strain 875]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=983546 ACN9LR_RS13940 WP_000644908.1 2839526..2840551(-) (cytR) [Escherichia coli strain 875]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625