Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSU13_RS05515 Genome accession   NZ_CP151986
Coordinates   1098607..1098804 (+) Length   65 a.a.
NCBI ID   WP_034282083.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0049     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1093607..1103804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU13_RS05485 (NSU13_05485) - 1094023..1094202 (+) 180 WP_008348517.1 YjzC family protein -
  NSU13_RS05490 (NSU13_05490) - 1094366..1095631 (+) 1266 WP_041117120.1 MFS transporter -
  NSU13_RS05495 (NSU13_05495) - 1095744..1095938 (-) 195 WP_003211779.1 YjzD family protein -
  NSU13_RS05500 (NSU13_05500) - 1096151..1096891 (+) 741 WP_024425057.1 hypothetical protein -
  NSU13_RS05505 (NSU13_05505) - 1096965..1097540 (+) 576 WP_024426490.1 hypothetical protein -
  NSU13_RS05510 (NSU13_05510) med 1097632..1098594 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  NSU13_RS05515 (NSU13_05515) comZ 1098607..1098804 (+) 198 WP_034282083.1 ComZ family protein Regulator
  NSU13_RS05520 (NSU13_05520) - 1098814..1099047 (-) 234 WP_034282082.1 hypothetical protein -
  NSU13_RS05525 (NSU13_05525) - 1099219..1100157 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NSU13_RS05530 (NSU13_05530) fabF 1100179..1101420 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NSU13_RS05535 (NSU13_05535) - 1101498..1102301 (+) 804 WP_342489921.1 DUF2268 domain-containing protein -
  NSU13_RS05540 (NSU13_05540) - 1102451..1103431 (+) 981 WP_034282076.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1509

>NTDB_id=983540 NSU13_RS05515 WP_034282083.1 1098607..1098804(+) (comZ) [Bacillus sp. FSL M8-0049]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=983540 NSU13_RS05515 WP_034282083.1 1098607..1098804(+) (comZ) [Bacillus sp. FSL M8-0049]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGACCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment