Detailed information NTG0983515

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSS80_RS17370
• Genome accession: NZ_CP151985
• Coordinates: 3320731..3321387 (-)
• Length: 218 a.a.
• NCBI ID: WP_260983460.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M8-0350
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3315731..3326387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS80_RS17335 (NSS80_17335)	fliW	3315869..3316303 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSS80_RS17340 (NSS80_17340)	-	3316332..3316910 (-)	579	WP_317221809.1	DUF6470 family protein	-
NSS80_RS17345 (NSS80_17345)	flgL	3316957..3317865 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSS80_RS17350 (NSS80_17350)	flgK	3317875..3319395 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSS80_RS17355 (NSS80_17355)	-	3319411..3319893 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSS80_RS17360 (NSS80_17360)	flgM	3319912..3320175 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSS80_RS17365 (NSS80_17365)	-	3320255..3320674 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSS80_RS17370 (NSS80_17370)	comFC	3320731..3321387 (-)	657	WP_260983460.1	ComF family protein	Machinery gene
NSS80_RS17375 (NSS80_17375)	-	3321414..3321707 (-)	294	WP_041088040.1	competence protein ComFB	-
NSS80_RS17380 (NSS80_17380)	comFA	3321757..3323154 (-)	1398	WP_342498356.1	DEAD/DEAH box helicase	Machinery gene
NSS80_RS17385 (NSS80_17385)	-	3323275..3324117 (-)	843	WP_024423625.1	DegV family protein	-
NSS80_RS17390 (NSS80_17390)	degU	3324333..3325022 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSS80_RS17395 (NSS80_17395)	degS	3325087..3326262 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24841.89 Da
• Isoelectric Point: 9.9148

>NTDB_id=983515 NSS80_RS17370 WP_260983460.1 3320731..3321387(-) (comFC) [Bacillus sp. FSL M8-0350]
MPAFTWKSFLLLNDDRLCVACKNHLVKIDRPICPTCGRAQSNDQLCQDCNSWNERSDSTKVLVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983515 NSS80_RS17370 WP_260983460.1 3320731..3321387(-) (comFC) [Bacillus sp. FSL M8-0350]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGATCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae TIGR4	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae Rx1	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae D39	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae R6	37.209	98.624	0.367