Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSS80_RS07075 Genome accession   NZ_CP151985
Coordinates   1387043..1387615 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0350     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1382043..1392615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS80_RS07045 (NSS80_07045) dapD 1382158..1382868 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSS80_RS07050 (NSS80_07050) - 1382951..1384081 (+) 1131 WP_317222063.1 N-acetyldiaminopimelate deacetylase -
  NSS80_RS07055 (NSS80_07055) - 1384132..1384374 (+) 243 WP_024424725.1 YkuS family protein -
  NSS80_RS07060 (NSS80_07060) - 1384397..1385206 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  NSS80_RS07065 (NSS80_07065) ahpA 1385478..1386020 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NSS80_RS07070 (NSS80_07070) - 1386103..1386561 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  NSS80_RS07075 (NSS80_07075) rok 1387043..1387615 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  NSS80_RS07080 (NSS80_07080) - 1387663..1388580 (-) 918 WP_034623329.1 hypothetical protein -
  NSS80_RS07085 (NSS80_07085) - 1388666..1389247 (+) 582 WP_317222062.1 molybdenum cofactor guanylyltransferase -
  NSS80_RS07090 (NSS80_07090) - 1389278..1390294 (+) 1017 WP_034623325.1 ThiF family adenylyltransferase -
  NSS80_RS07095 (NSS80_07095) glp 1390304..1391581 (+) 1278 WP_248351431.1 gephyrin-like molybdotransferase Glp -
  NSS80_RS07100 (NSS80_07100) mobB 1391563..1392087 (+) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSS80_RS07105 (NSS80_07105) - 1392111..1392575 (+) 465 WP_198527505.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=983487 NSS80_RS07075 WP_024426871.1 1387043..1387615(+) (rok) [Bacillus sp. FSL M8-0350]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=983487 NSS80_RS07075 WP_024426871.1 1387043..1387615(+) (rok) [Bacillus sp. FSL M8-0350]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAACTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment