Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSS80_RS05700 Genome accession   NZ_CP151985
Coordinates   1134184..1134381 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus sp. FSL M8-0350     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1129184..1139381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS80_RS05670 (NSS80_05670) - 1129602..1129781 (+) 180 WP_008348517.1 YjzC family protein -
  NSS80_RS05675 (NSS80_05675) - 1129945..1131210 (+) 1266 WP_034282089.1 MFS transporter -
  NSS80_RS05680 (NSS80_05680) - 1131321..1131515 (-) 195 WP_003211779.1 YjzD family protein -
  NSS80_RS05685 (NSS80_05685) - 1131728..1132468 (+) 741 WP_135032345.1 hypothetical protein -
  NSS80_RS05690 (NSS80_05690) - 1132542..1133117 (+) 576 WP_024426490.1 hypothetical protein -
  NSS80_RS05695 (NSS80_05695) med 1133209..1134171 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  NSS80_RS05700 (NSS80_05700) comZ 1134184..1134381 (+) 198 WP_024425054.1 ComZ family protein Regulator
  NSS80_RS05705 (NSS80_05705) - 1134391..1134624 (-) 234 WP_024426489.1 hypothetical protein -
  NSS80_RS05710 (NSS80_05710) - 1134796..1135734 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  NSS80_RS05715 (NSS80_05715) fabF 1135756..1136997 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  NSS80_RS05720 (NSS80_05720) - 1137075..1137878 (+) 804 WP_024425050.1 DUF2268 domain-containing protein -
  NSS80_RS05725 (NSS80_05725) - 1138028..1139008 (+) 981 WP_025093401.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=983479 NSS80_RS05700 WP_024425054.1 1134184..1134381(+) (comZ) [Bacillus sp. FSL M8-0350]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=983479 NSS80_RS05700 WP_024425054.1 1134184..1134381(+) (comZ) [Bacillus sp. FSL M8-0350]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCACAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAAGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment