Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NSS80_RS00255 | Genome accession | NZ_CP151985 |
| Coordinates | 47079..47369 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0350 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42079..52369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS80_RS00215 (NSS80_00215) | - | 42111..42440 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| NSS80_RS00220 (NSS80_00220) | - | 42453..42893 (+) | 441 | WP_024425626.1 | YaaR family protein | - |
| NSS80_RS00225 (NSS80_00225) | holB | 42905..43894 (+) | 990 | WP_034624445.1 | DNA polymerase III subunit delta' | - |
| NSS80_RS00230 (NSS80_00230) | - | 43897..44724 (+) | 828 | WP_024425628.1 | stage 0 sporulation family protein | - |
| NSS80_RS00235 (NSS80_00235) | yabA | 44739..45092 (+) | 354 | WP_024425629.1 | DNA replication initiation control protein YabA | - |
| NSS80_RS00240 (NSS80_00240) | - | 45148..45891 (+) | 744 | WP_024427205.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NSS80_RS00245 (NSS80_00245) | - | 45878..46177 (+) | 300 | WP_034284140.1 | GIY-YIG nuclease family protein | - |
| NSS80_RS00250 (NSS80_00250) | rsmI | 46152..47033 (+) | 882 | WP_034284141.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NSS80_RS00255 (NSS80_00255) | abrB | 47079..47369 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| NSS80_RS00260 (NSS80_00260) | metG | 47890..49890 (+) | 2001 | WP_041115197.1 | methionine--tRNA ligase | - |
| NSS80_RS00265 (NSS80_00265) | - | 49971..50738 (+) | 768 | WP_024425634.1 | TatD family hydrolase | - |
| NSS80_RS00270 (NSS80_00270) | - | 50983..52185 (+) | 1203 | WP_034284147.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=983465 NSS80_RS00255 WP_087975202.1 47079..47369(-) (abrB) [Bacillus sp. FSL M8-0350]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=983465 NSS80_RS00255 WP_087975202.1 47079..47369(-) (abrB) [Bacillus sp. FSL M8-0350]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GTTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GTTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |