Detailed information NTG0983459

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACN9LZ_RS19155
• Genome accession: NZ_CP183993
• Coordinates: 3826728..3827720 (-)
• Length: 330 a.a.
• NCBI ID: WP_000081550.1
• Uniprot ID: A0A370V765
• Organism: Escherichia coli strain 736
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 3821728..3832720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LZ_RS19135 (ACN9LZ_19135)	ygbM	3822366..3823142 (+)	777	WP_001136914.1	HPr family phosphocarrier protein	-
ACN9LZ_RS19140 (ACN9LZ_19140)	ygbN	3823231..3824595 (+)	1365	WP_000104433.1	GntP family transporter	-
ACN9LZ_RS19145 (ACN9LZ_19145)	-	3824738..3825781 (-)	1044	WP_001161583.1	MBL fold metallo-hydrolase	-
ACN9LZ_RS19150 (ACN9LZ_19150)	-	3826006..3826557 (+)	552	WP_001179444.1	flavodoxin family protein	-
ACN9LZ_RS19155 (ACN9LZ_19155)	rpoS	3826728..3827720 (-)	993	WP_000081550.1	RNA polymerase sigma factor RpoS	Regulator
ACN9LZ_RS19160 (ACN9LZ_19160)	nlpD	3827783..3828877 (-)	1095	WP_306278776.1	murein hydrolase activator NlpD	-
ACN9LZ_RS19165 (ACN9LZ_19165)	pcm	3829062..3829688 (-)	627	WP_000254708.1	protein-L-isoaspartate O-methyltransferase	-
ACN9LZ_RS19170 (ACN9LZ_19170)	surE	3829682..3830443 (-)	762	WP_001295182.1	5'/3'-nucleotidase SurE	-
ACN9LZ_RS19175 (ACN9LZ_19175)	truD	3830424..3831473 (-)	1050	WP_000568920.1	tRNA pseudouridine(13) synthase TruD	-
ACN9LZ_RS19180 (ACN9LZ_19180)	ispF	3831470..3831949 (-)	480	WP_001219237.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACN9LZ_RS19185 (ACN9LZ_19185)	ispD	3831949..3832659 (-)	711	WP_000246149.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 37972.84 Da
• Isoelectric Point: 4.5597

>NTDB_id=983459 ACN9LZ_RS19155 WP_000081550.1 3826728..3827720(-) (rpoS) [Escherichia coli strain 736]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE

Nucleotide

• Length: 993 bp

>NTDB_id=983459 ACN9LZ_RS19155 WP_000081550.1 3826728..3827720(-) (rpoS) [Escherichia coli strain 736]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGCTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTGATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATCGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCACGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCATTGCTGGACATCCTGGCCGAT
GAAAAAGAGAATGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAATAA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (174-248)

• Sigma-70 region 2 (Sigma70_r2) (94-163)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (56-88)

• Sigma-70, region 4 (Sigma70_r4) (262-315)

3D structure

• AlphaFold DB: A0A370V765

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	73.065	97.879	0.715