Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NSQ34_RS05470 Genome accession   NZ_CP151984
Coordinates   1095263..1096225 (+) Length   320 a.a.
NCBI ID   WP_176967568.1    Uniprot ID   -
Organism   Bacillus sp. FSL P2-0069     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1090263..1101225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ34_RS05440 (NSQ34_05440) argF 1090601..1091551 (+) 951 WP_176967527.1 ornithine carbamoyltransferase -
  NSQ34_RS05445 (NSQ34_05445) - 1091654..1091833 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ34_RS05450 (NSQ34_05450) - 1091997..1093262 (+) 1266 WP_041117120.1 MFS transporter -
  NSQ34_RS05455 (NSQ34_05455) - 1093375..1093569 (-) 195 WP_003211779.1 YjzD family protein -
  NSQ34_RS05460 (NSQ34_05460) - 1093782..1094522 (+) 741 WP_176967526.1 hypothetical protein -
  NSQ34_RS05465 (NSQ34_05465) - 1094596..1095171 (+) 576 WP_176967525.1 nad binding enzyme -
  NSQ34_RS05470 (NSQ34_05470) med 1095263..1096225 (+) 963 WP_176967568.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ34_RS05475 (NSQ34_05475) comZ 1096238..1096435 (+) 198 WP_034282083.1 ComZ family protein Regulator
  NSQ34_RS05480 (NSQ34_05480) - 1096444..1096677 (-) 234 WP_034282082.1 hypothetical protein -
  NSQ34_RS05485 (NSQ34_05485) - 1096849..1097787 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NSQ34_RS05490 (NSQ34_05490) fabF 1097809..1099050 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NSQ34_RS05495 (NSQ34_05495) - 1099128..1099931 (+) 804 WP_176967524.1 DUF2268 domain-containing protein -
  NSQ34_RS05500 (NSQ34_05500) - 1100081..1101061 (+) 981 WP_076840858.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35655.48 Da        Isoelectric Point: 5.0003

>NTDB_id=983417 NSQ34_RS05470 WP_176967568.1 1095263..1096225(+) (med) [Bacillus sp. FSL P2-0069]
MKYQRLVMIFSFLLLLSSCSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=983417 NSQ34_RS05470 WP_176967568.1 1095263..1096225(+) (med) [Bacillus sp. FSL P2-0069]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTTCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACTGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631


Multiple sequence alignment