Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NST65_RS06750 Genome accession   NZ_CP151983
Coordinates   1334992..1335564 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0248     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1329992..1340564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST65_RS06720 (NST65_06720) dapD 1330108..1330818 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NST65_RS06725 (NST65_06725) - 1330900..1332030 (+) 1131 WP_034281599.1 N-acetyldiaminopimelate deacetylase -
  NST65_RS06730 (NST65_06730) - 1332081..1332323 (+) 243 WP_024424725.1 YkuS family protein -
  NST65_RS06735 (NST65_06735) - 1332346..1333155 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  NST65_RS06740 (NST65_06740) ahpA 1333427..1333969 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NST65_RS06745 (NST65_06745) - 1334052..1334510 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  NST65_RS06750 (NST65_06750) rok 1334992..1335564 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  NST65_RS06755 (NST65_06755) - 1335612..1336541 (-) 930 WP_111927313.1 sigmaE regulated sporulation protein -
  NST65_RS06760 (NST65_06760) - 1336627..1337208 (+) 582 WP_111927315.1 molybdenum cofactor guanylyltransferase -
  NST65_RS06765 (NST65_06765) - 1337239..1338255 (+) 1017 WP_111927317.1 ThiF family adenylyltransferase -
  NST65_RS06770 (NST65_06770) glp 1338265..1339542 (+) 1278 WP_181566869.1 gephyrin-like molybdotransferase Glp -
  NST65_RS06775 (NST65_06775) mobB 1339524..1340048 (+) 525 WP_101677244.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NST65_RS06780 (NST65_06780) - 1340045..1340536 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=983364 NST65_RS06750 WP_024426871.1 1334992..1335564(+) (rok) [Bacillus sp. FSL P4-0248]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=983364 NST65_RS06750 WP_024426871.1 1334992..1335564(+) (rok) [Bacillus sp. FSL P4-0248]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATACCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment