Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NST65_RS06625 Genome accession   NZ_CP151983
Coordinates   1314853..1315314 (-) Length   153 a.a.
NCBI ID   WP_111927303.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0248     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1309853..1320314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST65_RS06600 (NST65_06600) - 1310462..1311346 (+) 885 WP_041116475.1 cation diffusion facilitator family transporter -
  NST65_RS06605 (NST65_06605) - 1311410..1311562 (-) 153 WP_162842519.1 hypothetical protein -
  NST65_RS06610 (NST65_06610) - 1311865..1312404 (+) 540 WP_024424707.1 RDD family protein -
  NST65_RS06615 (NST65_06615) - 1312524..1313834 (+) 1311 WP_340898814.1 MFS transporter -
  NST65_RS06620 (NST65_06620) - 1313908..1314816 (+) 909 WP_024424709.1 chemotaxis protein -
  NST65_RS06625 (NST65_06625) kre 1314853..1315314 (-) 462 WP_111927303.1 YkyB family protein Regulator
  NST65_RS06630 (NST65_06630) - 1315810..1315986 (+) 177 WP_181566868.1 hypothetical protein -
  NST65_RS06635 (NST65_06635) - 1316113..1317030 (-) 918 WP_111927305.1 AraC family transcriptional regulator -
  NST65_RS06640 (NST65_06640) - 1317144..1318040 (+) 897 WP_111927307.1 EamA family transporter -
  NST65_RS06645 (NST65_06645) - 1318193..1318408 (-) 216 WP_024424712.1 hypothetical protein -
  NST65_RS06650 (NST65_06650) - 1318668..1319945 (-) 1278 WP_034281582.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17715.29 Da        Isoelectric Point: 10.2452

>NTDB_id=983363 NST65_RS06625 WP_111927303.1 1314853..1315314(-) (kre) [Bacillus sp. FSL P4-0248]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTATNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=983363 NST65_RS06625 WP_111927303.1 1314853..1315314(-) (kre) [Bacillus sp. FSL P4-0248]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCAACAAACCCCAAGTTTCTTTACCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.325

100

0.758

Multiple sequence alignment