Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST65_RS05125 Genome accession   NZ_CP151983
Coordinates   1024975..1025925 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0248     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1019975..1030925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST65_RS05100 (NST65_05100) comK 1020328..1020906 (+) 579 WP_034282183.1 competence protein ComK Regulator
  NST65_RS05105 (NST65_05105) - 1021205..1021687 (+) 483 WP_034282182.1 hypothetical protein -
  NST65_RS05110 (NST65_05110) - 1021719..1023158 (-) 1440 WP_034282181.1 PLP-dependent aminotransferase family protein -
  NST65_RS05115 (NST65_05115) - 1023304..1024473 (+) 1170 WP_342489338.1 MFS transporter -
  NST65_RS05120 (NST65_05120) - 1024539..1024814 (+) 276 WP_065214458.1 barstar family protein -
  NST65_RS05125 (NST65_05125) ceuB 1024975..1025925 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  NST65_RS05130 (NST65_05130) - 1025918..1026868 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  NST65_RS05135 (NST65_05135) - 1026859..1027617 (+) 759 WP_041117050.1 ATP-binding cassette domain-containing protein -
  NST65_RS05140 (NST65_05140) - 1027640..1028584 (+) 945 WP_342489339.1 siderophore ABC transporter substrate-binding protein -
  NST65_RS05145 (NST65_05145) - 1028723..1029676 (+) 954 WP_034282168.1 LCP family protein -
  NST65_RS05150 (NST65_05150) - 1029745..1030107 (-) 363 WP_342489340.1 hypothetical protein -
  NST65_RS05155 (NST65_05155) - 1030264..1030881 (+) 618 WP_252050322.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=983352 NST65_RS05125 WP_041117046.1 1024975..1025925(+) (ceuB) [Bacillus sp. FSL P4-0248]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983352 NST65_RS05125 WP_041117046.1 1024975..1025925(+) (ceuB) [Bacillus sp. FSL P4-0248]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCAGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491

Multiple sequence alignment