Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NST65_RS04085 Genome accession   NZ_CP151983
Coordinates   832165..832956 (+) Length   263 a.a.
NCBI ID   WP_065215150.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0248     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 827165..837956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST65_RS04050 (NST65_04050) - 827251..827799 (+) 549 WP_034283751.1 thioredoxin family protein -
  NST65_RS04055 (NST65_04055) - 828133..828600 (+) 468 WP_034283752.1 DUF393 domain-containing protein -
  NST65_RS04060 (NST65_04060) - 828637..829893 (-) 1257 WP_034283753.1 transcriptional regulator -
  NST65_RS04065 (NST65_04065) - 830168..830755 (+) 588 WP_065215148.1 nitroreductase -
  NST65_RS04070 (NST65_04070) - 830794..830949 (-) 156 WP_024425223.1 YfhD family protein -
  NST65_RS04075 (NST65_04075) - 831011..831121 (-) 111 WP_017358836.1 YfhE family protein -
  NST65_RS04080 (NST65_04080) - 831174..832070 (-) 897 WP_065215149.1 TIGR01777 family oxidoreductase -
  NST65_RS04085 (NST65_04085) recX 832165..832956 (+) 792 WP_065215150.1 recombination regulator RecX Regulator
  NST65_RS04090 (NST65_04090) - 832960..833274 (+) 315 WP_047202061.1 YfhH family protein -
  NST65_RS04095 (NST65_04095) - 833296..833469 (-) 174 WP_008360604.1 YpzG family protein -
  NST65_RS04100 (NST65_04100) - 833495..833644 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NST65_RS04105 (NST65_04105) - 833761..834033 (+) 273 WP_024425219.1 YfhJ family protein -
  NST65_RS04110 (NST65_04110) - 834334..835317 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30649.12 Da        Isoelectric Point: 6.6682

>NTDB_id=983347 NST65_RS04085 WP_065215150.1 832165..832956(+) (recX) [Bacillus sp. FSL P4-0248]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQILKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=983347 NST65_RS04085 WP_065215150.1 832165..832956(+) (recX) [Bacillus sp. FSL P4-0248]
ATGCCTTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGACGACACGATTGAACAAGCGCTGTCGCAATACCCTGATGATTTACAGCTGGAGGAA
GCCGTAAAGCAGATTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATTGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAGGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTTAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment