Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | NSQ25_RS05100 | Genome accession | NZ_CP151982 |
| Coordinates | 1017836..1018414 (+) | Length | 192 a.a. |
| NCBI ID | WP_034282183.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0512 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1012836..1023414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ25_RS05080 (NSQ25_05080) | - | 1013330..1014625 (-) | 1296 | WP_024426546.1 | globin-coupled sensor protein | - |
| NSQ25_RS05085 (NSQ25_05085) | - | 1014719..1016251 (-) | 1533 | WP_326136613.1 | FAD-dependent oxidoreductase | - |
| NSQ25_RS05090 (NSQ25_05090) | - | 1016393..1017253 (+) | 861 | WP_144496553.1 | SDR family oxidoreductase | - |
| NSQ25_RS05095 (NSQ25_05095) | - | 1017310..1017546 (-) | 237 | WP_087977005.1 | IDEAL domain-containing protein | - |
| NSQ25_RS05100 (NSQ25_05100) | comK | 1017836..1018414 (+) | 579 | WP_034282183.1 | competence protein ComK | Regulator |
| NSQ25_RS05105 (NSQ25_05105) | - | 1018713..1019195 (+) | 483 | WP_070325675.1 | hypothetical protein | - |
| NSQ25_RS05110 (NSQ25_05110) | - | 1019227..1020666 (-) | 1440 | WP_034282181.1 | PLP-dependent aminotransferase family protein | - |
| NSQ25_RS05115 (NSQ25_05115) | - | 1020812..1021981 (+) | 1170 | WP_034282180.1 | MFS transporter | - |
| NSQ25_RS05120 (NSQ25_05120) | - | 1022047..1022322 (+) | 276 | WP_065214458.1 | barstar family protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22322.36 Da Isoelectric Point: 8.7962
>NTDB_id=983290 NSQ25_RS05100 WP_034282183.1 1017836..1018414(+) (comK) [Bacillus sp. FSL R5-0512]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=983290 NSQ25_RS05100 WP_034282183.1 1017836..1018414(+) (comK) [Bacillus sp. FSL R5-0512]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAGCCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGAACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAGCCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGAACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |