Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V3C22_RS06600 Genome accession   NZ_CP183775
Coordinates   1366339..1366818 (-) Length   159 a.a.
NCBI ID   WP_002302426.1    Uniprot ID   -
Organism   Streptococcus mutans strain Xc     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1361339..1371818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS06585 (V3C22_06585) alsS 1362067..1363746 (-) 1680 WP_002272000.1 acetolactate synthase AlsS -
  V3C22_RS06590 (V3C22_06590) - 1363879..1365111 (-) 1233 WP_002267189.1 tetratricopeptide repeat protein -
  V3C22_RS06595 (V3C22_06595) - 1365101..1366270 (-) 1170 WP_014677894.1 AI-2E family transporter -
  V3C22_RS06600 (V3C22_06600) mutX 1366339..1366818 (-) 480 WP_002302426.1 NUDIX hydrolase Machinery gene
  V3C22_RS06605 (V3C22_06605) rfbB 1367113..1368159 (-) 1047 WP_226706796.1 dTDP-glucose 4,6-dehydratase -
  V3C22_RS06610 (V3C22_06610) - 1368552..1368725 (-) 174 WP_002263086.1 hypothetical protein -
  V3C22_RS06615 (V3C22_06615) - 1368788..1369384 (-) 597 WP_002264623.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  V3C22_RS06620 (V3C22_06620) rfbA 1369386..1370255 (-) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  V3C22_RS06625 (V3C22_06625) - 1370551..1371339 (-) 789 WP_002265199.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18928.64 Da        Isoelectric Point: 5.6576

>NTDB_id=983276 V3C22_RS06600 WP_002302426.1 1366339..1366818(-) (mutX) [Streptococcus mutans strain Xc]
MIKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=983276 V3C22_RS06600 WP_002302426.1 1366339..1366818(-) (mutX) [Streptococcus mutans strain Xc]
ATGATAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692