Detailed information NTG0983271

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: NSU11_RS17110
• Genome accession: NZ_CP151981
• Coordinates: 3303806..3305203 (-)
• Length: 465 a.a.
• NCBI ID: WP_279586125.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0712
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3298806..3310203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU11_RS17075 (NSU11_17075)	flgL	3299007..3299915 (-)	909	WP_024423617.1	flagellar hook-associated protein FlgL	-
NSU11_RS17080 (NSU11_17080)	flgK	3299925..3301445 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSU11_RS17085 (NSU11_17085)	-	3301461..3301943 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSU11_RS17090 (NSU11_17090)	flgM	3301962..3302225 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSU11_RS17095 (NSU11_17095)	-	3302305..3302724 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
NSU11_RS17100 (NSU11_17100)	comFC	3302781..3303437 (-)	657	WP_243837412.1	ComF family protein	Machinery gene
NSU11_RS17105 (NSU11_17105)	-	3303464..3303757 (-)	294	WP_024423623.1	competence protein ComFB	-
NSU11_RS17110 (NSU11_17110)	comFA	3303806..3305203 (-)	1398	WP_279586125.1	DEAD/DEAH box helicase	Machinery gene
NSU11_RS17115 (NSU11_17115)	-	3305324..3306166 (-)	843	WP_342493686.1	DegV family protein	-
NSU11_RS17120 (NSU11_17120)	degU	3306382..3307071 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSU11_RS17125 (NSU11_17125)	degS	3307136..3308311 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
NSU11_RS17130 (NSU11_17130)	-	3308533..3309201 (+)	669	WP_012011434.1	YigZ family protein	-

Sequence

Protein

• Length: 465 a.a.
• Molecular weight: 53252.21 Da
• Isoelectric Point: 9.8999

>NTDB_id=983271 NSU11_RS17110 WP_279586125.1 3303806..3305203(-) (comFA) [Bacillus sp. FSL R5-0712]
MNMDKAMELMRQLHSRHLLTVETKCPQSNLDWLEEKGLVNRSPAIERKVNGFTCCRCGVSHKRYFAHSPCEVCQKDCVYC
RSCIMMGKVAECGFLYEWTGPQMVETCRAELTWQGELSKGQKRASERMIEAIKNKFDLLVWAVCGAGKTEVLFHGIEYAL
NQGMNVCIATPRTDVVLELEPRLRKAFQGVTITVLYGGSSQRFQITPLVITTTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKAMRKNRGVRIYLSATPSKKMTREVSRGKLEAIKIPLRFHEQPLPVPTFHWIGHWKKKLKKNQLPPKVMNWMQ
RHIANKRRILLFVPSIATMKKVTKILREQSLNVEGVSADDPDRKQKVQHFRDYVYDVLVTTTILERGVTIPNVQVGVLGS
ESTIFTESALVQISGRVGRHPDYCTGDVFLFHFGLTRSMKQAKKHIAKMNDTAAKEFSEKQCGFN

Nucleotide

• Length: 1398 bp

>NTDB_id=983271 NSU11_RS17110 WP_279586125.1 3303806..3305203(-) (comFA) [Bacillus sp. FSL R5-0712]
TTGAATATGGACAAAGCAATGGAACTAATGCGGCAGCTGCATTCACGCCATCTGCTCACCGTTGAAACAAAGTGCCCACA
GTCCAATTTAGATTGGCTGGAGGAGAAGGGCTTAGTCAATCGGTCTCCAGCCATTGAGAGGAAAGTAAATGGTTTTACAT
GCTGCCGGTGCGGTGTATCACACAAGCGGTATTTCGCTCATTCTCCATGTGAAGTGTGTCAAAAGGATTGTGTGTACTGT
AGATCATGCATCATGATGGGAAAAGTAGCAGAATGTGGGTTTCTTTATGAATGGACAGGTCCACAAATGGTAGAAACATG
TCGAGCCGAATTAACATGGCAGGGAGAGCTGTCTAAAGGACAAAAAAGAGCGTCAGAAAGAATGATTGAAGCTATTAAAA
ACAAATTTGATCTACTTGTTTGGGCGGTTTGCGGAGCAGGGAAAACGGAAGTACTTTTTCACGGAATCGAATATGCGTTA
AATCAAGGAATGAATGTCTGTATTGCGACACCTAGAACAGATGTAGTGCTTGAACTCGAACCACGGCTTAGAAAAGCATT
TCAAGGGGTGACAATTACCGTACTTTACGGAGGTAGTTCTCAAAGGTTTCAAATAACACCGCTTGTGATCACCACAACCC
ACCAGCTGATGAGATACAAAAATGCTTTTGATGTGCTCATTGTAGATGAAGTCGATGCCTTCCCTTATTCAATGGATGAG
CGTCTCCAATTTGCTGTTCTAAAGGCGATGAGAAAGAACAGAGGGGTCAGGATTTATTTAAGTGCGACACCCTCTAAAAA
AATGACGAGAGAGGTTTCTCGTGGAAAACTGGAAGCGATAAAAATTCCTTTGCGTTTTCACGAGCAACCATTACCCGTAC
CGACCTTTCATTGGATCGGTCATTGGAAAAAGAAATTAAAAAAGAACCAGCTGCCCCCTAAAGTGATGAATTGGATGCAG
AGACATATTGCAAATAAGAGAAGAATATTACTTTTTGTTCCTTCAATTGCTACCATGAAGAAGGTAACGAAGATTCTTCG
AGAACAATCCTTGAACGTGGAGGGGGTATCTGCCGATGATCCGGATAGAAAACAAAAGGTTCAGCACTTTAGAGATTACG
TATACGATGTACTAGTTACAACCACTATTCTAGAAAGAGGCGTAACGATTCCGAATGTTCAAGTGGGGGTACTAGGTTCG
GAATCTACTATTTTTACAGAGAGTGCACTTGTTCAGATTTCTGGGCGGGTAGGCAGACACCCGGATTATTGTACAGGAGA
TGTTTTCCTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAGCATATCGCAAAAATGAATGATACGGCTG
CAAAAGAGTTTTCTGAAAAACAGTGTGGGTTCAACTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (116-265)

• Helicase conserved C-terminal domain (Helicase_C) (324-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.412	98.065	0.514
comFA/cflA	Streptococcus pneumoniae Rx1	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae D39	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae R6	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae TIGR4	38.269	94.409	0.361