Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V3C22_RS04800 Genome accession   NZ_CP183775
Coordinates   1009025..1009696 (+) Length   223 a.a.
NCBI ID   WP_014678012.1    Uniprot ID   Q8VUH0
Organism   Streptococcus mutans strain Xc     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1004025..1014696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS04790 (V3C22_04790) - 1006226..1006978 (+) 753 WP_002265085.1 ABC transporter ATP-binding protein -
  V3C22_RS04795 (V3C22_04795) - 1006980..1008983 (+) 2004 WP_002263238.1 ABC transporter permease -
  V3C22_RS04800 (V3C22_04800) braR 1009025..1009696 (+) 672 WP_014678012.1 DNA-binding response regulator Regulator
  V3C22_RS04805 (V3C22_04805) - 1009693..1010646 (+) 954 WP_002263236.1 sensor histidine kinase -
  V3C22_RS04810 (V3C22_04810) citC 1010797..1011846 (-) 1050 WP_002270831.1 [citrate (pro-3S)-lyase] ligase -
  V3C22_RS04815 (V3C22_04815) citG 1012022..1012912 (-) 891 WP_002288786.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  V3C22_RS04820 (V3C22_04820) - 1012918..1013607 (-) 690 WP_002269136.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 25828.94 Da        Isoelectric Point: 5.0036

>NTDB_id=983262 V3C22_RS04800 WP_014678012.1 1009025..1009696(+) (braR) [Streptococcus mutans strain Xc]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIYTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=983262 V3C22_RS04800 WP_014678012.1 1009025..1009696(+) (braR) [Streptococcus mutans strain Xc]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATCTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAACCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTCAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTTATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VUH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435