Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NSU11_RS05635 Genome accession   NZ_CP151981
Coordinates   1158555..1159517 (+) Length   320 a.a.
NCBI ID   WP_024425055.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0712     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1153555..1164517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU11_RS05605 (NSU11_05605) argF 1153895..1154845 (+) 951 WP_342493839.1 ornithine carbamoyltransferase -
  NSU11_RS05610 (NSU11_05610) - 1154948..1155127 (+) 180 WP_008348517.1 YjzC family protein -
  NSU11_RS05615 (NSU11_05615) - 1155291..1156556 (+) 1266 WP_342493840.1 MFS transporter -
  NSU11_RS05620 (NSU11_05620) - 1156667..1156861 (-) 195 WP_003211779.1 YjzD family protein -
  NSU11_RS05625 (NSU11_05625) - 1157074..1157814 (+) 741 WP_024425057.1 hypothetical protein -
  NSU11_RS05630 (NSU11_05630) - 1157888..1158463 (+) 576 WP_342493841.1 nad binding enzyme -
  NSU11_RS05635 (NSU11_05635) med 1158555..1159517 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  NSU11_RS05640 (NSU11_05640) comZ 1159530..1159727 (+) 198 WP_024425054.1 ComZ family protein Regulator
  NSU11_RS05645 (NSU11_05645) - 1159737..1159970 (-) 234 WP_024426489.1 hypothetical protein -
  NSU11_RS05650 (NSU11_05650) - 1160142..1161080 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  NSU11_RS05655 (NSU11_05655) fabF 1161102..1162343 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  NSU11_RS05660 (NSU11_05660) - 1162421..1163224 (+) 804 WP_268436410.1 DUF2268 domain-containing protein -
  NSU11_RS05665 (NSU11_05665) - 1163374..1164354 (+) 981 WP_025093401.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35639.48 Da        Isoelectric Point: 5.0003

>NTDB_id=983233 NSU11_RS05635 WP_024425055.1 1158555..1159517(+) (med) [Bacillus sp. FSL R5-0712]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=983233 NSU11_RS05635 WP_024425055.1 1158555..1159517(+) (med) [Bacillus sp. FSL R5-0712]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTATAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631


Multiple sequence alignment