Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSU11_RS04265 Genome accession   NZ_CP151981
Coordinates   897774..898565 (+) Length   263 a.a.
NCBI ID   WP_024425221.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0712     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 892774..903565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU11_RS04230 (NSU11_04230) - 892860..893408 (+) 549 WP_024425227.1 thioredoxin family protein -
  NSU11_RS04235 (NSU11_04235) - 893742..894209 (+) 468 WP_024425226.1 DUF393 domain-containing protein -
  NSU11_RS04240 (NSU11_04240) - 894246..895502 (-) 1257 WP_024425225.1 transcriptional regulator -
  NSU11_RS04245 (NSU11_04245) - 895777..896364 (+) 588 WP_197202913.1 nitroreductase -
  NSU11_RS04250 (NSU11_04250) - 896403..896558 (-) 156 WP_024425223.1 YfhD family protein -
  NSU11_RS04255 (NSU11_04255) - 896620..896730 (-) 111 WP_017358836.1 YfhE family protein -
  NSU11_RS04260 (NSU11_04260) - 896783..897679 (-) 897 WP_171464081.1 TIGR01777 family oxidoreductase -
  NSU11_RS04265 (NSU11_04265) recX 897774..898565 (+) 792 WP_024425221.1 recombination regulator RecX Regulator
  NSU11_RS04270 (NSU11_04270) - 898569..898883 (+) 315 WP_041087336.1 YfhH family protein -
  NSU11_RS04275 (NSU11_04275) - 898907..899080 (-) 174 WP_008360604.1 YpzG family protein -
  NSU11_RS04280 (NSU11_04280) - 899106..899255 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NSU11_RS04285 (NSU11_04285) - 899372..899644 (+) 273 WP_024425219.1 YfhJ family protein -
  NSU11_RS04290 (NSU11_04290) - 899944..900927 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30649.12 Da        Isoelectric Point: 6.6685

>NTDB_id=983225 NSU11_RS04265 WP_024425221.1 897774..898565(+) (recX) [Bacillus sp. FSL R5-0712]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDETIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=983225 NSU11_RS04265 WP_024425221.1 897774..898565(+) (recX) [Bacillus sp. FSL R5-0712]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAATACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCATGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGAAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGAAACGATTGAACAGGCGCTATCCCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTGTTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment