Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NSS96_RS08755 Genome accession   NZ_CP151980
Coordinates   1724927..1725307 (+) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus sp. FSL W7-1336     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1719927..1730307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS96_RS08745 (NSS96_08745) - 1720422..1723565 (+) 3144 WP_305933654.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  NSS96_RS08750 (NSS96_08750) - 1723759..1724667 (+) 909 WP_024425124.1 trypsin-like serine protease -
  NSS96_RS08755 (NSS96_08755) nucA/comI 1724927..1725307 (+) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NSS96_RS08760 (NSS96_08760) - 1725453..1726301 (+) 849 WP_041117519.1 STAS domain-containing protein -
  NSS96_RS08765 (NSS96_08765) - 1726334..1726876 (-) 543 WP_041109224.1 IseA DL-endopeptidase inhibitor family protein -
  NSS96_RS08770 (NSS96_08770) - 1727173..1727607 (+) 435 WP_101677146.1 hypothetical protein -
  NSS96_RS08775 (NSS96_08775) lexA 1727653..1728273 (-) 621 WP_101677145.1 transcriptional repressor LexA -
  NSS96_RS08780 (NSS96_08780) yneA 1728432..1728743 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  NSS96_RS08785 (NSS96_08785) - 1728761..1729408 (+) 648 WP_101677144.1 recombinase family protein -
  NSS96_RS08790 (NSS96_08790) - 1729478..1729708 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=983187 NSS96_RS08755 WP_044335941.1 1724927..1725307(+) (nucA/comI) [Bacillus sp. FSL W7-1336]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=983187 NSS96_RS08755 WP_044335941.1 1724927..1725307(+) (nucA/comI) [Bacillus sp. FSL W7-1336]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTTGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTTAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterProScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment