Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NST13_RS10845 Genome accession   NZ_CP151979
Coordinates   2164850..2166604 (-) Length   584 a.a.
NCBI ID   WP_342580599.1    Uniprot ID   -
Organism   Ureibacillus sp. FSL W7-1570     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2159850..2171604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST13_RS10830 (NST13_10830) - 2160144..2161484 (-) 1341 WP_342580597.1 c-type cytochrome -
  NST13_RS10835 (NST13_10835) - 2161931..2162824 (-) 894 WP_342580598.1 peptidylprolyl isomerase -
  NST13_RS10840 (NST13_10840) rcrQ 2162977..2164746 (-) 1770 WP_342581847.1 ABC transporter ATP-binding protein Regulator
  NST13_RS10845 (NST13_10845) rcrP 2164850..2166604 (-) 1755 WP_342580599.1 ABC transporter ATP-binding protein Regulator
  NST13_RS10850 (NST13_10850) - 2166643..2166849 (+) 207 WP_342580600.1 hypothetical protein -
  NST13_RS10855 (NST13_10855) - 2166859..2167050 (-) 192 WP_342580601.1 hypothetical protein -
  NST13_RS10860 (NST13_10860) - 2168046..2169035 (+) 990 WP_342470949.1 ABC transporter substrate-binding protein -
  NST13_RS10865 (NST13_10865) - 2169042..2170070 (+) 1029 WP_208651345.1 iron ABC transporter permease -
  NST13_RS10870 (NST13_10870) - 2170067..2170855 (+) 789 WP_342580602.1 ABC transporter ATP-binding protein -
  NST13_RS10875 (NST13_10875) - 2170886..2171410 (+) 525 WP_342470946.1 hypothetical protein -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64912.83 Da        Isoelectric Point: 9.5372

>NTDB_id=983143 NST13_RS10845 WP_342580599.1 2164850..2166604(-) (rcrP) [Ureibacillus sp. FSL W7-1570]
MLKIVKYFHKTEWSLMFLGIFLIIVQVWLDLKLPDYMAEITTLIQMEGTSVKELIKPGSSMLLCAIGSMMASIIVCFTTA
KIAAGLSKRLRGQIFEKTLSFSMEEMNRFSTASLITRSTNDITQVQLFIAMGLQVLIKAPILATWAIVKISNKSWQWTAA
TGAAVFILILMLTMIIVFAIPKFKMIQTLTDNLNRVTRENLTGLRVIRAYNAEKHQTEKFEKANNDLTNTNLFVSRLMVM
VPPGMSLIMSGLSLSIYWIGAFIIHEAALEDRITLFSNMVVFTSYAMQVVIAFMMVSIVFVMLPRVSVSVKRILEVLETK
TKIKDGTETKGNPKHAGEVEFKNVSFTYPGSAEPVLHNISFKAQKGETVAFIGSTGSGKTTIVNLIPRFYDATEGEVLVD
GINVKEYKQDALHAKIGYVSQTAVLFSGTVASNVALGSEMVSREAVKRAVEIAQGKEFVEKLDEQYNAAVAQGGANFSGG
QKQRLSIARAIYRNPEIYIFDDSFSALDYKTDRALREALRNATRNATTLIVAQRIGTIKDADQIIVLENGRIVGKGTHEQ
LMESCKTYQEIAYSQLSKEELNHG

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=983143 NST13_RS10845 WP_342580599.1 2164850..2166604(-) (rcrP) [Ureibacillus sp. FSL W7-1570]
ATGCTAAAAATCGTAAAGTATTTTCATAAAACAGAATGGAGCTTGATGTTCCTCGGAATTTTTCTAATTATTGTTCAAGT
GTGGCTGGATTTGAAACTGCCCGATTATATGGCGGAAATTACAACGCTCATCCAAATGGAAGGGACATCTGTAAAAGAGC
TCATCAAACCGGGCAGTTCCATGTTGCTTTGTGCAATCGGCAGCATGATGGCTTCAATCATTGTCTGTTTTACCACTGCA
AAAATTGCAGCCGGTTTATCGAAACGTCTTCGCGGCCAGATTTTTGAAAAGACACTCTCTTTTTCAATGGAAGAGATGAA
CCGTTTTTCGACGGCCAGTTTGATTACCCGTTCAACGAATGATATTACACAAGTCCAGCTGTTTATAGCAATGGGTTTGC
AGGTGTTGATTAAAGCACCGATCTTGGCGACATGGGCCATTGTGAAAATTTCCAATAAAAGCTGGCAATGGACAGCGGCA
ACCGGTGCAGCCGTGTTCATTTTAATCCTGATGTTGACCATGATTATTGTATTTGCCATTCCAAAATTCAAAATGATCCA
AACCCTGACGGATAATTTGAACCGGGTGACCCGTGAAAATTTGACGGGGCTTCGCGTGATCAGGGCGTATAATGCCGAGA
AACATCAAACGGAAAAGTTTGAAAAAGCGAATAACGATTTGACGAATACAAACTTGTTTGTCAGCCGTCTTATGGTGATG
GTTCCACCCGGAATGTCCTTGATCATGTCCGGGCTAAGCCTTTCGATTTATTGGATTGGCGCATTTATCATTCATGAAGC
GGCGCTGGAAGACCGTATCACCCTCTTTTCCAATATGGTCGTATTCACGTCCTATGCCATGCAAGTCGTCATCGCCTTTA
TGATGGTCAGCATTGTGTTTGTGATGCTTCCGCGTGTTTCCGTATCAGTGAAGCGGATATTGGAAGTACTTGAGACTAAA
ACGAAAATTAAAGATGGTACTGAAACAAAGGGCAATCCGAAACATGCAGGTGAAGTGGAGTTTAAAAATGTCAGTTTTAC
CTATCCCGGATCGGCTGAACCGGTGCTCCACAATATCAGTTTCAAAGCGCAAAAAGGAGAAACGGTTGCTTTCATCGGTT
CAACGGGAAGCGGGAAAACAACAATTGTGAATTTGATTCCCCGGTTTTACGATGCAACAGAGGGAGAAGTGTTGGTGGAC
GGAATCAACGTGAAAGAATATAAGCAGGATGCACTTCATGCAAAAATCGGGTATGTTTCACAAACGGCGGTATTATTTAG
CGGTACGGTTGCATCAAATGTCGCGCTCGGCTCTGAAATGGTTTCAAGAGAAGCGGTAAAACGGGCGGTAGAAATTGCCC
AAGGAAAAGAGTTTGTTGAAAAGCTGGATGAGCAATACAATGCAGCGGTAGCCCAAGGGGGAGCAAACTTTTCCGGAGGG
CAAAAACAACGGCTATCCATTGCCCGCGCCATTTATCGCAACCCTGAAATCTATATTTTCGATGATTCTTTTTCCGCCTT
GGATTATAAAACGGACCGGGCTTTAAGGGAAGCGTTAAGGAATGCGACAAGAAATGCCACCACTTTGATTGTTGCCCAGC
GGATCGGAACAATCAAAGATGCAGACCAAATCATCGTATTGGAAAATGGCAGAATCGTCGGAAAAGGTACGCATGAACAA
TTGATGGAAAGTTGCAAAACCTACCAGGAAATCGCCTATTCCCAGCTTTCAAAGGAGGAATTGAATCATGGCTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-503)

ABC transporter transmembrane region (ABC_membrane)

(16-289)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.419

100

0.527

Multiple sequence alignment