Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST13_RS10500 Genome accession   NZ_CP151979
Coordinates   2099000..2099953 (-) Length   317 a.a.
NCBI ID   WP_342471020.1    Uniprot ID   -
Organism   Ureibacillus sp. FSL W7-1570     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2094000..2104953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST13_RS10480 (NST13_10480) - 2094252..2095280 (-) 1029 WP_342471023.1 siderophore ABC transporter substrate-binding protein -
  NST13_RS10485 (NST13_10485) - 2095333..2097144 (-) 1812 WP_342580562.1 IS1182 family transposase -
  NST13_RS10490 (NST13_10490) - 2097290..2098057 (-) 768 WP_342471022.1 ABC transporter ATP-binding protein -
  NST13_RS10495 (NST13_10495) - 2098054..2099010 (-) 957 WP_342471021.1 iron chelate uptake ABC transporter family permease subunit -
  NST13_RS10500 (NST13_10500) ceuB 2099000..2099953 (-) 954 WP_342471020.1 ABC transporter permease Machinery gene
  NST13_RS10505 (NST13_10505) - 2100145..2101632 (-) 1488 WP_342580563.1 peptide MFS transporter -
  NST13_RS10510 (NST13_10510) hflX 2101923..2103203 (-) 1281 WP_342471018.1 GTPase HflX -
  NST13_RS10515 (NST13_10515) putP 2103303..2104793 (-) 1491 WP_342580564.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34842.12 Da        Isoelectric Point: 9.5266

>NTDB_id=983141 NST13_RS10500 WP_342471020.1 2099000..2099953(-) (ceuB) [Ureibacillus sp. FSL W7-1570]
MRLWMLILTAIILSLVSLFIGAIDIKPTDLLDWESQQTQIFLISRVPRLMAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISILLFSQAAYMEKILFSFIFAFGGTILFMQILDRIKFKDAVFVPLIGIMYGNILSSITTFFAYEGDLI
QNINTWLMGSFTLVISGRYELLYVSVPAILLAYLYANKFTVAGMGEDFAKNLGLSYKAVLNLGLILVAVISTTVVLTVGV
IPYLGLIVPNIVSLYMGDNLRKTIPHTIMLGIVFLLICDIIGRVVVYPFEIPVNVTVAVIGSLLFLIMLFRGRAYAK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=983141 NST13_RS10500 WP_342471020.1 2099000..2099953(-) (ceuB) [Ureibacillus sp. FSL W7-1570]
ATGAGGCTATGGATGTTGATACTTACAGCAATCATCCTGTCGCTCGTTTCGCTGTTTATTGGCGCGATTGATATAAAACC
GACTGATTTATTGGACTGGGAATCCCAGCAAACGCAAATATTCCTGATCAGTAGGGTGCCAAGGCTGATGGCGATTATTT
TGGCAGGCGCAGGAATGAGTATTGCTGGTTTAATCATGCAAAGTTTAAGTCGCAATAAGTTCGTTTCACCAACTACAGCA
GGCACATTGGATGCAGCAAAATTGGGAATTCTCATTTCCATCTTGTTGTTTTCACAAGCAGCATATATGGAAAAAATTCT
TTTTAGCTTCATCTTTGCGTTCGGCGGTACCATTTTATTTATGCAAATTTTAGATCGCATCAAGTTTAAAGATGCCGTTT
TTGTTCCGCTGATCGGTATCATGTATGGAAATATTTTATCTTCCATTACAACTTTCTTTGCATATGAGGGAGACTTGATT
CAAAATATCAACACTTGGTTGATGGGCAGTTTTACATTGGTCATCTCCGGGCGGTATGAACTGCTGTATGTAAGTGTTCC
TGCCATCCTATTGGCTTATTTATATGCAAATAAATTTACGGTTGCCGGAATGGGCGAGGATTTTGCCAAAAACTTGGGGC
TCAGTTACAAAGCCGTATTGAATCTTGGTTTAATTCTTGTTGCAGTCATTTCAACGACAGTCGTATTGACGGTCGGTGTA
ATCCCTTACTTGGGGCTGATTGTTCCGAATATTGTGTCCCTTTATATGGGGGACAACTTGCGGAAAACGATTCCTCATAC
AATTATGTTAGGAATTGTGTTCCTGTTAATTTGCGACATTATTGGCCGGGTAGTGGTTTATCCTTTCGAAATTCCGGTCA
ATGTGACAGTCGCAGTAATAGGCAGTTTGCTCTTCTTAATCATGTTGTTTAGGGGGAGAGCATATGCGAAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

99.685

0.517

Multiple sequence alignment