Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   NST32_RS05455 Genome accession   NZ_CP151978
Coordinates   1061011..1061961 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0215     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1056011..1066961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST32_RS05425 (NST32_05425) - 1056710..1056967 (+) 258 WP_342474716.1 helix-turn-helix domain-containing protein -
  NST32_RS05430 (NST32_05430) - 1057105..1058532 (+) 1428 WP_342474717.1 viroplasmin family protein -
  NST32_RS05435 (NST32_05435) - 1058566..1058931 (+) 366 WP_173407928.1 type II toxin-antitoxin system RnlB family antitoxin -
  NST32_RS05440 (NST32_05440) - 1059155..1059511 (+) 357 Protein_1014 competence protein ComK -
  NST32_RS05445 (NST32_05445) - 1059810..1060292 (+) 483 WP_342474718.1 hypothetical protein -
  NST32_RS05450 (NST32_05450) - 1060575..1060850 (+) 276 WP_041117044.1 barstar family protein -
  NST32_RS05455 (NST32_05455) ceuB 1061011..1061961 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  NST32_RS05460 (NST32_05460) - 1061954..1062904 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  NST32_RS05465 (NST32_05465) - 1062895..1063653 (+) 759 WP_034282171.1 ATP-binding cassette domain-containing protein -
  NST32_RS05470 (NST32_05470) - 1063676..1064620 (+) 945 WP_340899048.1 siderophore ABC transporter substrate-binding protein -
  NST32_RS05475 (NST32_05475) - 1064759..1065712 (+) 954 WP_034282168.1 LCP family protein -
  NST32_RS05480 (NST32_05480) - 1065781..1066143 (-) 363 WP_034282166.1 hypothetical protein -
  NST32_RS05485 (NST32_05485) - 1066300..1066917 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=983072 NST32_RS05455 WP_041117046.1 1061011..1061961(+) (ceuB) [Bacillus sp. FSL L8-0215]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983072 NST32_RS05455 WP_041117046.1 1061011..1061961(+) (ceuB) [Bacillus sp. FSL L8-0215]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGAAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment