Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NST32_RS00255 | Genome accession | NZ_CP151978 |
| Coordinates | 47075..47365 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0215 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42075..52365
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST32_RS00215 (NST32_00215) | - | 42107..42436 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| NST32_RS00220 (NST32_00220) | - | 42449..42889 (+) | 441 | WP_024425626.1 | YaaR family protein | - |
| NST32_RS00225 (NST32_00225) | holB | 42901..43890 (+) | 990 | WP_024425627.1 | DNA polymerase III subunit delta' | - |
| NST32_RS00230 (NST32_00230) | - | 43893..44720 (+) | 828 | WP_024425628.1 | stage 0 sporulation family protein | - |
| NST32_RS00235 (NST32_00235) | yabA | 44735..45088 (+) | 354 | WP_024425629.1 | DNA replication initiation control protein YabA | - |
| NST32_RS00240 (NST32_00240) | - | 45144..45887 (+) | 744 | WP_024427205.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NST32_RS00245 (NST32_00245) | - | 45874..46173 (+) | 300 | WP_024425631.1 | GIY-YIG nuclease family protein | - |
| NST32_RS00250 (NST32_00250) | rsmI | 46148..47029 (+) | 882 | WP_326484181.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NST32_RS00255 (NST32_00255) | abrB | 47075..47365 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| NST32_RS00260 (NST32_00260) | metG | 47886..49886 (+) | 2001 | WP_342474622.1 | methionine--tRNA ligase | - |
| NST32_RS00265 (NST32_00265) | - | 49968..50735 (+) | 768 | WP_024425634.1 | TatD family hydrolase | - |
| NST32_RS00270 (NST32_00270) | - | 50980..52182 (+) | 1203 | WP_044334281.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=983062 NST32_RS00255 WP_087975202.1 47075..47365(-) (abrB) [Bacillus sp. FSL L8-0215]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=983062 NST32_RS00255 WP_087975202.1 47075..47365(-) (abrB) [Bacillus sp. FSL L8-0215]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCTTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCTTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |