Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST24_RS11575 | Genome accession | NZ_CP151977 |
| Coordinates | 2263903..2264238 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0286 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2258903..2269238
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST24_RS11555 (NST24_11555) | gcvT | 2259381..2260478 (-) | 1098 | WP_342461792.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST24_RS11560 (NST24_11560) | - | 2261038..2262708 (+) | 1671 | WP_342461793.1 | SNF2-related protein | - |
| NST24_RS11565 (NST24_11565) | - | 2262723..2263520 (+) | 798 | WP_342461794.1 | YqhG family protein | - |
| NST24_RS11570 (NST24_11570) | - | 2263705..2263869 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| NST24_RS11575 (NST24_11575) | sinR | 2263903..2264238 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| NST24_RS11580 (NST24_11580) | - | 2264306..2265106 (-) | 801 | WP_008342195.1 | TasA family protein | - |
| NST24_RS11585 (NST24_11585) | - | 2265165..2265737 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| NST24_RS11590 (NST24_11590) | tapA | 2265787..2266314 (-) | 528 | WP_342461795.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST24_RS11595 (NST24_11595) | - | 2266567..2266893 (+) | 327 | WP_342461796.1 | DUF3889 domain-containing protein | - |
| NST24_RS11600 (NST24_11600) | - | 2266928..2267122 (-) | 195 | WP_008342191.1 | YqzE family protein | - |
| NST24_RS11605 (NST24_11605) | comGG | 2267183..2267566 (-) | 384 | WP_251211210.1 | competence type IV pilus minor pilin ComGG | - |
| NST24_RS11610 (NST24_11610) | comGF | 2267563..2268060 (-) | 498 | WP_216894677.1 | competence type IV pilus minor pilin ComGF | - |
| NST24_RS11615 (NST24_11615) | comGE | 2268002..2268316 (-) | 315 | WP_047945462.1 | competence type IV pilus minor pilin ComGE | - |
| NST24_RS11620 (NST24_11620) | comGD | 2268300..2268746 (-) | 447 | WP_342461797.1 | competence type IV pilus minor pilin ComGD | - |
| NST24_RS11625 (NST24_11625) | comGC | 2268739..2269032 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=983033 NST24_RS11575 WP_017357978.1 2263903..2264238(+) (sinR) [Bacillus sp. FSL R5-0286]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983033 NST24_RS11575 WP_017357978.1 2263903..2264238(+) (sinR) [Bacillus sp. FSL R5-0286]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |