Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NST24_RS07010 Genome accession   NZ_CP151977
Coordinates   1383113..1383694 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0286     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378113..1388694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST24_RS06985 (NST24_06985) - 1378779..1379957 (+) 1179 WP_045034211.1 N-acetyldiaminopimelate deacetylase -
  NST24_RS06990 (NST24_06990) - 1380008..1380250 (+) 243 WP_003211408.1 YkuS family protein -
  NST24_RS06995 (NST24_06995) - 1380273..1381082 (-) 810 WP_135008956.1 mechanosensitive ion channel family protein -
  NST24_RS07000 (NST24_07000) ahpA 1381354..1381896 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NST24_RS07005 (NST24_07005) - 1382173..1382631 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NST24_RS07010 (NST24_07010) rok 1383113..1383694 (+) 582 WP_007498648.1 hypothetical protein Regulator
  NST24_RS07015 (NST24_07015) - 1383757..1384674 (-) 918 WP_041507373.1 hypothetical protein -
  NST24_RS07020 (NST24_07020) - 1384758..1385339 (+) 582 WP_342462481.1 molybdenum cofactor guanylyltransferase -
  NST24_RS07025 (NST24_07025) - 1385369..1386385 (+) 1017 WP_113766986.1 thiazole biosynthesis adenylyltransferase ThiF -
  NST24_RS07030 (NST24_07030) glp 1386395..1387669 (+) 1275 WP_342462482.1 gephyrin-like molybdotransferase Glp -
  NST24_RS07035 (NST24_07035) mobB 1387651..1388178 (+) 528 WP_024719560.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NST24_RS07040 (NST24_07040) - 1388171..1388662 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=983023 NST24_RS07010 WP_007498648.1 1383113..1383694(+) (rok) [Bacillus sp. FSL R5-0286]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=983023 NST24_RS07010 WP_007498648.1 1383113..1383694(+) (rok) [Bacillus sp. FSL R5-0286]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTTAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment