Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NST24_RS06885 Genome accession   NZ_CP151977
Coordinates   1363058..1363519 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus sp. FSL R5-0286     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1358058..1368519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST24_RS06860 (NST24_06860) - 1358662..1359546 (+) 885 WP_342462477.1 cation diffusion facilitator family transporter -
  NST24_RS06865 (NST24_06865) - 1359611..1359763 (-) 153 WP_017367142.1 hypothetical protein -
  NST24_RS06870 (NST24_06870) - 1360064..1360603 (+) 540 WP_045035146.1 RDD family protein -
  NST24_RS06875 (NST24_06875) - 1360729..1362039 (+) 1311 WP_007498688.1 MFS transporter -
  NST24_RS06880 (NST24_06880) - 1362113..1363021 (+) 909 WP_024719666.1 chemotaxis protein -
  NST24_RS06885 (NST24_06885) kre 1363058..1363519 (-) 462 WP_007498684.1 YkyB family protein Regulator
  NST24_RS06890 (NST24_06890) - 1363997..1364212 (-) 216 WP_008348016.1 hypothetical protein -
  NST24_RS06895 (NST24_06895) - 1364380..1364556 (+) 177 WP_340959700.1 hypothetical protein -
  NST24_RS06900 (NST24_06900) - 1364704..1366056 (-) 1353 WP_096880954.1 IS1182 family transposase -
  NST24_RS06905 (NST24_06905) - 1366195..1367472 (-) 1278 WP_234879695.1 MFS transporter -
  NST24_RS06910 (NST24_06910) - 1367546..1368043 (-) 498 WP_073414335.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=983022 NST24_RS06885 WP_007498684.1 1363058..1363519(-) (kre) [Bacillus sp. FSL R5-0286]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=983022 NST24_RS06885 WP_007498684.1 1363058..1363519(-) (kre) [Bacillus sp. FSL R5-0286]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCTACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment