Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NSQ60_RS11755 | Genome accession | NZ_CP151976 |
| Coordinates | 2281444..2281779 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W8-0502 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2276444..2286779
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ60_RS11735 (NSQ60_11735) | gcvT | 2276921..2278018 (-) | 1098 | WP_046311744.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NSQ60_RS11740 (NSQ60_11740) | - | 2278580..2280250 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| NSQ60_RS11745 (NSQ60_11745) | - | 2280265..2281062 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| NSQ60_RS11750 (NSQ60_11750) | - | 2281246..2281410 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| NSQ60_RS11755 (NSQ60_11755) | sinR | 2281444..2281779 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NSQ60_RS11760 (NSQ60_11760) | - | 2281847..2282647 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| NSQ60_RS11765 (NSQ60_11765) | - | 2282705..2283277 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| NSQ60_RS11770 (NSQ60_11770) | tapA | 2283330..2283857 (-) | 528 | WP_046311747.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSQ60_RS11775 (NSQ60_11775) | - | 2284157..2284435 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| NSQ60_RS11780 (NSQ60_11780) | - | 2284470..2284664 (-) | 195 | WP_046311750.1 | YqzE family protein | - |
| NSQ60_RS11785 (NSQ60_11785) | comGG | 2284724..2285107 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ60_RS11790 (NSQ60_11790) | comGF | 2285104..2285631 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ60_RS11795 (NSQ60_11795) | comGE | 2285543..2285857 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| NSQ60_RS11800 (NSQ60_11800) | comGD | 2285841..2286287 (-) | 447 | WP_046311754.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ60_RS11805 (NSQ60_11805) | comGC | 2286280..2286573 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=982972 NSQ60_RS11755 WP_024422969.1 2281444..2281779(+) (sinR) [Bacillus sp. FSL W8-0502]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=982972 NSQ60_RS11755 WP_024422969.1 2281444..2281779(+) (sinR) [Bacillus sp. FSL W8-0502]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |