Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSQ60_RS05625 Genome accession   NZ_CP151976
Coordinates   1116137..1116343 (+) Length   68 a.a.
NCBI ID   WP_046310543.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0502     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111137..1121343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ60_RS05595 (NSQ60_05595) - 1111553..1111732 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ60_RS05600 (NSQ60_05600) - 1111896..1113161 (+) 1266 WP_046310541.1 MFS transporter -
  NSQ60_RS05605 (NSQ60_05605) - 1113274..1113468 (-) 195 WP_003211779.1 YjzD family protein -
  NSQ60_RS05610 (NSQ60_05610) - 1113681..1114421 (+) 741 WP_024425057.1 hypothetical protein -
  NSQ60_RS05615 (NSQ60_05615) - 1114495..1115070 (+) 576 WP_024426490.1 hypothetical protein -
  NSQ60_RS05620 (NSQ60_05620) med 1115162..1116124 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ60_RS05625 (NSQ60_05625) comZ 1116137..1116343 (+) 207 WP_046310543.1 ComZ family protein Regulator
  NSQ60_RS05630 (NSQ60_05630) - 1116353..1116586 (-) 234 WP_034282082.1 hypothetical protein -
  NSQ60_RS05635 (NSQ60_05635) - 1116758..1117696 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NSQ60_RS05640 (NSQ60_05640) fabF 1117718..1118959 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NSQ60_RS05645 (NSQ60_05645) - 1119037..1119840 (+) 804 WP_024425050.1 DUF2268 domain-containing protein -
  NSQ60_RS05650 (NSQ60_05650) - 1119990..1120970 (+) 981 WP_046310546.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 68 a.a.        Molecular weight: 7706.70 Da        Isoelectric Point: 4.0202

>NTDB_id=982954 NSQ60_RS05625 WP_046310543.1 1116137..1116343(+) (comZ) [Bacillus sp. FSL W8-0502]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLTLFTSVMQEAYELGKADAEDAESEKATE

Nucleotide


Download         Length: 207 bp        

>NTDB_id=982954 NSQ60_RS05625 WP_046310543.1 1116137..1116343(+) (comZ) [Bacillus sp. FSL W8-0502]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGACCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70

88.235

0.618

Multiple sequence alignment