Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   NSQ17_RS11315 Genome accession   NZ_CP151975
Coordinates   2209738..2210541 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL W8-0629     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2204738..2215541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ17_RS11300 (NSQ17_11300) - 2206954..2207190 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  NSQ17_RS11305 (NSQ17_11305) - 2207224..2207961 (-) 738 WP_113767106.1 glycerophosphodiester phosphodiesterase -
  NSQ17_RS11310 (NSQ17_11310) - 2208188..2209288 (-) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  NSQ17_RS11315 (NSQ17_11315) spo0A 2209738..2210541 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NSQ17_RS11320 (NSQ17_11320) spoIVB 2210825..2212102 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  NSQ17_RS11325 (NSQ17_11325) recN 2212301..2214034 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  NSQ17_RS11330 (NSQ17_11330) argR 2214069..2214518 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=982910 NSQ17_RS11315 WP_008342226.1 2209738..2210541(-) (spo0A) [Bacillus sp. FSL W8-0629]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=982910 NSQ17_RS11315 WP_008342226.1 2209738..2210541(-) (spo0A) [Bacillus sp. FSL W8-0629]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACGAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment