Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ17_RS07080 Genome accession   NZ_CP151975
Coordinates   1384553..1385134 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0629     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1379553..1390134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ17_RS07055 (NSQ17_07055) - 1380220..1381398 (+) 1179 WP_268362108.1 N-acetyldiaminopimelate deacetylase -
  NSQ17_RS07060 (NSQ17_07060) - 1381449..1381691 (+) 243 WP_024424725.1 YkuS family protein -
  NSQ17_RS07065 (NSQ17_07065) - 1381714..1382523 (-) 810 WP_024719563.1 mechanosensitive ion channel family protein -
  NSQ17_RS07070 (NSQ17_07070) ahpA 1382795..1383337 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NSQ17_RS07075 (NSQ17_07075) - 1383614..1384072 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NSQ17_RS07080 (NSQ17_07080) rok 1384553..1385134 (+) 582 WP_007498648.1 hypothetical protein Regulator
  NSQ17_RS07085 (NSQ17_07085) - 1385197..1386114 (-) 918 WP_144678863.1 sigmaE regulated sporulation protein -
  NSQ17_RS07090 (NSQ17_07090) - 1386198..1386779 (+) 582 WP_268356711.1 molybdenum cofactor guanylyltransferase -
  NSQ17_RS07095 (NSQ17_07095) - 1386809..1387825 (+) 1017 WP_024719562.1 MoeB/ThiF family adenylyltransferase -
  NSQ17_RS07100 (NSQ17_07100) glp 1387835..1389109 (+) 1275 WP_342467981.1 gephyrin-like molybdotransferase Glp -
  NSQ17_RS07105 (NSQ17_07105) mobB 1389091..1389618 (+) 528 WP_342467982.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSQ17_RS07110 (NSQ17_07110) - 1389611..1390102 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=982902 NSQ17_RS07080 WP_007498648.1 1384553..1385134(+) (rok) [Bacillus sp. FSL W8-0629]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=982902 NSQ17_RS07080 WP_007498648.1 1384553..1385134(+) (rok) [Bacillus sp. FSL W8-0629]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCGTTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCTGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment