Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSQ17_RS06960 Genome accession   NZ_CP151975
Coordinates   1366060..1366521 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus sp. FSL W8-0629     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1361060..1371521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ17_RS06935 (NSQ17_06935) - 1361665..1362549 (+) 885 WP_017359428.1 cation diffusion facilitator family transporter -
  NSQ17_RS06940 (NSQ17_06940) - 1362614..1362766 (-) 153 WP_017367142.1 hypothetical protein -
  NSQ17_RS06945 (NSQ17_06945) - 1363067..1363606 (+) 540 WP_039169112.1 RDD family protein -
  NSQ17_RS06950 (NSQ17_06950) - 1363732..1365042 (+) 1311 WP_170861579.1 MFS transporter -
  NSQ17_RS06955 (NSQ17_06955) - 1365116..1366024 (+) 909 WP_024719666.1 chemotaxis protein -
  NSQ17_RS06960 (NSQ17_06960) kre 1366060..1366521 (-) 462 WP_007498684.1 YkyB family protein Regulator
  NSQ17_RS06965 (NSQ17_06965) - 1366999..1367214 (-) 216 WP_058337408.1 hypothetical protein -
  NSQ17_RS06970 (NSQ17_06970) - 1367380..1367556 (+) 177 WP_162837046.1 hypothetical protein -
  NSQ17_RS06975 (NSQ17_06975) - 1367621..1368898 (-) 1278 WP_008348012.1 MFS transporter -
  NSQ17_RS06980 (NSQ17_06980) - 1368972..1369469 (-) 498 WP_041507380.1 L,D-transpeptidase family protein -
  NSQ17_RS06985 (NSQ17_06985) - 1369626..1370483 (-) 858 WP_144678868.1 metallophosphoesterase -
  NSQ17_RS06990 (NSQ17_06990) fadH 1370623..1371387 (+) 765 WP_144678867.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=982901 NSQ17_RS06960 WP_007498684.1 1366060..1366521(-) (kre) [Bacillus sp. FSL W8-0629]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=982901 NSQ17_RS06960 WP_007498684.1 1366060..1366521(-) (kre) [Bacillus sp. FSL W8-0629]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment