Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ17_RS05350 Genome accession   NZ_CP151975
Coordinates   1059445..1060395 (+) Length   316 a.a.
NCBI ID   WP_342467926.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0629     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1054445..1065395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ17_RS05330 (NSQ17_05330) - 1055679..1056161 (+) 483 WP_008348662.1 hypothetical protein -
  NSQ17_RS05335 (NSQ17_05335) - 1056192..1057631 (-) 1440 WP_342467924.1 PLP-dependent aminotransferase family protein -
  NSQ17_RS05340 (NSQ17_05340) - 1057775..1058944 (+) 1170 WP_342467925.1 MFS transporter -
  NSQ17_RS05345 (NSQ17_05345) - 1059007..1059285 (+) 279 WP_041507495.1 barstar family protein -
  NSQ17_RS05350 (NSQ17_05350) ceuB 1059445..1060395 (+) 951 WP_342467926.1 ABC transporter permease Machinery gene
  NSQ17_RS05355 (NSQ17_05355) - 1060388..1061338 (+) 951 WP_342467927.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ17_RS05360 (NSQ17_05360) - 1061329..1062087 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  NSQ17_RS05365 (NSQ17_05365) - 1062110..1063054 (+) 945 WP_342467928.1 siderophore ABC transporter substrate-binding protein -
  NSQ17_RS05370 (NSQ17_05370) - 1063194..1064150 (+) 957 WP_007499147.1 LCP family protein -
  NSQ17_RS05375 (NSQ17_05375) - 1064383..1064817 (-) 435 WP_039167431.1 hypothetical protein -
  NSQ17_RS05380 (NSQ17_05380) - 1064903..1065265 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34998.39 Da        Isoelectric Point: 9.7475

>NTDB_id=982889 NSQ17_RS05350 WP_342467926.1 1059445..1060395(+) (ceuB) [Bacillus sp. FSL W8-0629]
MKLYQLILLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVNSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=982889 NSQ17_RS05350 WP_342467926.1 1059445..1060395(+) (ceuB) [Bacillus sp. FSL W8-0629]
ATGAAGTTGTACCAATTAATTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAATTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503

Multiple sequence alignment