Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | NSS78_RS05195 | Genome accession | NZ_CP151974 |
| Coordinates | 1073442..1074020 (+) | Length | 192 a.a. |
| NCBI ID | WP_003212419.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W8-0920 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1068442..1079020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS78_RS05175 (NSS78_05175) | - | 1068934..1070229 (-) | 1296 | WP_003211980.1 | globin-coupled sensor protein | - |
| NSS78_RS05180 (NSS78_05180) | - | 1070321..1071853 (-) | 1533 | WP_003211807.1 | FAD-dependent oxidoreductase | - |
| NSS78_RS05185 (NSS78_05185) | - | 1071999..1072859 (+) | 861 | WP_212046104.1 | SDR family oxidoreductase | - |
| NSS78_RS05190 (NSS78_05190) | - | 1072923..1073153 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| NSS78_RS05195 (NSS78_05195) | comK | 1073442..1074020 (+) | 579 | WP_003212419.1 | competence protein ComK | Regulator |
| NSS78_RS05200 (NSS78_05200) | - | 1074179..1075285 (+) | 1107 | WP_212046103.1 | D-TA family PLP-dependent enzyme | - |
| NSS78_RS05205 (NSS78_05205) | - | 1075601..1076083 (+) | 483 | WP_212046102.1 | hypothetical protein | - |
| NSS78_RS05210 (NSS78_05210) | - | 1076115..1077554 (-) | 1440 | WP_212046101.1 | PLP-dependent aminotransferase family protein | - |
| NSS78_RS05215 (NSS78_05215) | - | 1077699..1078868 (+) | 1170 | WP_212046100.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22376.45 Da Isoelectric Point: 8.7996
>NTDB_id=982828 NSS78_RS05195 WP_003212419.1 1073442..1074020(+) (comK) [Bacillus sp. FSL W8-0920]
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=982828 NSS78_RS05195 WP_003212419.1 1073442..1074020(+) (comK) [Bacillus sp. FSL W8-0920]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |