Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSS78_RS04220 Genome accession   NZ_CP151974
Coordinates   888924..889715 (+) Length   263 a.a.
NCBI ID   WP_050944745.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0920     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 883924..894715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS78_RS04185 (NSS78_04185) - 884007..884555 (+) 549 WP_003217810.1 thioredoxin family protein -
  NSS78_RS04190 (NSS78_04190) - 884892..885359 (+) 468 WP_212046485.1 DUF393 domain-containing protein -
  NSS78_RS04195 (NSS78_04195) - 885396..886652 (-) 1257 WP_050944748.1 transcriptional regulator -
  NSS78_RS04200 (NSS78_04200) - 886925..887512 (+) 588 WP_003217860.1 nitroreductase -
  NSS78_RS04205 (NSS78_04205) - 887553..887708 (-) 156 WP_012009317.1 YfhD family protein -
  NSS78_RS04210 (NSS78_04210) - 887770..887880 (-) 111 WP_017358836.1 YfhE family protein -
  NSS78_RS04215 (NSS78_04215) - 887933..888829 (-) 897 WP_212046484.1 TIGR01777 family oxidoreductase -
  NSS78_RS04220 (NSS78_04220) recX 888924..889715 (+) 792 WP_050944745.1 recombination regulator RecX Regulator
  NSS78_RS04225 (NSS78_04225) - 889719..890033 (+) 315 WP_050944744.1 YfhH family protein -
  NSS78_RS04230 (NSS78_04230) - 890056..890229 (-) 174 WP_003217811.1 YpzG family protein -
  NSS78_RS04235 (NSS78_04235) - 890255..890404 (-) 150 WP_212046483.1 small, acid-soluble spore protein K -
  NSS78_RS04240 (NSS78_04240) - 890521..890793 (+) 273 WP_003217809.1 YfhJ family protein -
  NSS78_RS04245 (NSS78_04245) - 891083..892066 (+) 984 WP_212046482.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30579.97 Da        Isoelectric Point: 6.8960

>NTDB_id=982824 NSS78_RS04220 WP_050944745.1 888924..889715(+) (recX) [Bacillus sp. FSL W8-0920]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKQYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDNIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSAKEIEQRIKLQLQRKGFSFGIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=982824 NSS78_RS04220 WP_050944745.1 888924..889715(+) (recX) [Bacillus sp. FSL W8-0920]
ATGCCCTATATTACAAAAATCTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAATACGCCTT
TAGCGTGGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTA
ACCGATTATTTGACGAAAAAAGAAATCCCGGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCAATACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCCTATGTCAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGCTAAAGCTCAAAGGGATAGATGATGACAACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAACGAAAAGGATTTTCGTTTGGGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTCTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATACGACGGGTCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment